Factsheet for TraesCS6B01G398500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G363900.1	Wheat	cytosol	97.44	97.44
HORVU6Hr1G086560.2	Barley	mitochondrion	95.17	86.12
Os02t0799000-01	Rice	cytosol, plastid	84.94	84.46
EES05962	Sorghum	cytosol	82.39	81.69
Zm00001d018394_P003	Maize	endoplasmic reticulum, vacuole	75.57	78.24
Zm00001d052018_P001	Maize	cytosol	59.66	77.21
TraesCS7B01G045100.1	Wheat	cytosol	72.16	71.95
GSMUA_Achr7P20900_001	Banana	nucleus	67.9	66.76
VIT_11s0118g00700.t01	Wine grape	cytosol	67.33	66.57
GSMUA_Achr3P13350_001	Banana	cytosol	54.55	65.31
Solyc12g010450.1.1	Tomato	cytosol, nucleus, peroxisome	55.68	62.03
KRH20243	Soybean	cytosol	66.76	61.36
KRH12874	Soybean	cytosol	65.34	60.69
KRH03568	Soybean	cytosol	65.91	60.57
PGSC0003DMT400020228	Potato	cytosol	65.34	60.05
KRH37886	Soybean	cytosol	64.77	59.84
PGSC0003DMT400078867	Potato	nucleus	63.92	58.75
Solyc07g007220.2.1	Tomato	nucleus	63.64	58.49
TraesCS7B01G256300.1	Wheat	mitochondrion, plastid	51.7	50.28
TraesCS1B01G216500.1	Wheat	plastid	47.44	45.14
TraesCS1B01G095600.1	Wheat	cytosol	43.75	40.1
TraesCS5B01G082500.1	Wheat	cytosol	42.9	39.43
TraesCS5B01G362300.1	Wheat	cytosol	28.12	25.92
TraesCS6B01G051200.1	Wheat	cytosol	23.01	24.92
TraesCS5B01G179300.1	Wheat	cytosol, nucleus, peroxisome	25.0	24.44
TraesCS4B01G184100.1	Wheat	mitochondrion	26.42	23.02
TraesCS7B01G411900.1	Wheat	cytosol	26.42	22.63
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	24.72	21.97
TraesCS2B01G374900.1	Wheat	cytosol	23.3	21.47
TraesCS3B01G378000.1	Wheat	cytosol	25.57	13.76

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF299	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS6B01G398500
EnsemblPlants:TraesCS6B01G398500.1	TIGR:cd00143	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:674100717..674104119

Molecular Weight (calculated)

39227.5 Da

IEP (calculated)

4.907

GRAVY (calculated)

-0.352

Length

352 amino acids

Sequence
(BLAST)

001: MCVEGFEDAQ IERPADFAME RVCENTVSID FKQAKMVTAM GESWHNFVPA IRSGDWSDIG GRDYMEDAHV CIPNLAKNFG YNMVDDEVIS FYGVFDGHGG
101: KDAAQYVRDN LPRVIVEDAA FPLELEKAVR RSFMQTDSQF AEKCSLQDGL SSGTTALTAM IFGRTLLVAN AGDCRAVLSR RGATIEMSKD HRTCCLNERK
201: RVESLGGYVD DGYLNGQLAV TRALGDWHLD GLKEMGKPGG PLSAEPELKM ITLTKDDEFL IIGSDGIWDY FSNQNSVDFA RRRLQEHNDL RRCCKEIVEE
301: AIRRGATDNL TAVMVSFHQE APPQIRVNRA GRVERSISAE GLHSLRVLLE GQ

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.