Factsheet for TraesCS6B01G051200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G037000.1	Wheat	cytosol	85.85	87.19
Os02t0606900-01	Rice	cytosol	39.69	37.94
TraesCS4B01G184100.1	Wheat	mitochondrion	42.77	34.41
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	37.85	31.06
TraesCS5B01G362300.1	Wheat	cytosol	35.38	30.1
TraesCS2B01G374900.1	Wheat	cytosol	35.38	30.1
KXG30563	Sorghum	mitochondrion	37.23	29.51
TraesCS7B01G411900.1	Wheat	cytosol	36.0	28.47
Os02t0600033-00	Rice	cytoskeleton, cytosol, nucleus	39.08	27.14
Os02t0599700-01	Rice	nucleus, peroxisome, plastid	18.15	26.58
Os02t0599150-01	Rice	cytosol	40.62	25.34
Os02t0598500-00	Rice	cytosol	40.62	25.34
TraesCS7B01G045100.1	Wheat	cytosol	25.85	23.8
TraesCS6B01G398500.1	Wheat	cytosol	24.92	23.01
TraesCS1B01G216500.1	Wheat	plastid	24.31	21.35
Os02t0607500-00	Rice	vacuole	37.54	21.0
TraesCS1B01G095600.1	Wheat	cytosol	24.62	20.83
TraesCS5B01G179300.1	Wheat	cytosol, nucleus, peroxisome	22.77	20.56
TraesCS5B01G082500.1	Wheat	cytosol	23.69	20.1
TraesCS7B01G256300.1	Wheat	mitochondrion, plastid	22.15	19.89
Os02t0599151-00	Rice	vacuole	40.0	17.69
TraesCS3B01G378000.1	Wheat	cytosol	20.31	10.09
Os02t0599200-01	Rice	cytosol, peroxisome	10.77	7.59

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF323	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS6B01G051200
EnsemblPlants:TraesCS6B01G051200.1	TIGR:cd00143	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6B:+:30354600..30357534

Molecular Weight (calculated)

35251.5 Da

IEP (calculated)

5.563

GRAVY (calculated)

-0.238

Length

325 amino acids

Sequence
(BLAST)

001: MGQGPSVSHE NSTIEYAAGS RKGSNSKVEN AHRTILDLDG SSSTSFFGVY DGHGGADVAL YCANNFHRVL VNDGDYKDNL DVALKRAFTR MDEQMDQNDD
101: WRTLANPPGF GVKLLCFPST PPLVQGPPYV EGSTACVVLI RGNQIIIGNV GDSCCVLSRD DGRQAIVLST KHTPEDKDER SSIENAGGQI LSVGGADLVN
201: GILPWTRAIG SFRFKPPSAG HIVTCTPDIH IEDITHDTEY LLVANRAFWD TTPISSEMAV QYVRQLSGTY SVASMCDRLL NLCRSPVDNL TLILVYFKPS
301: ARLPRPAPPA PTNLSVSELH VRSSD

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.