Factsheet for TraesCS4B01G184100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G185200.1	Wheat	mitochondrion	95.79	96.27
TraesCS4A01G120800.1	Wheat	cytosol	88.61	94.46
HORVU4Hr1G053970.1	Barley	mitochondrion, nucleus, plastid	82.67	78.04
Os02t0606900-01	Rice	cytosol	43.32	51.47
TraesCS6B01G051200.1	Wheat	cytosol	34.41	42.77
TraesCS2B01G374900.1	Wheat	cytosol	38.61	40.84
KXG30563	Sorghum	mitochondrion	37.38	36.83
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	34.65	35.35
TraesCS7B01G411900.1	Wheat	cytosol	34.9	34.31
TraesCS5B01G362300.1	Wheat	cytosol	32.43	34.29
Os02t0600033-00	Rice	cytoskeleton, cytosol, nucleus	39.6	34.19
Os02t0598500-00	Rice	cytosol	41.58	32.25
Os02t0599150-01	Rice	cytosol	41.58	32.25
Os02t0599700-01	Rice	nucleus, peroxisome, plastid	17.08	31.08
Os02t0607500-00	Rice	vacuole	43.07	29.95
TraesCS6B01G398500.1	Wheat	cytosol	23.02	26.42
TraesCS7B01G045100.1	Wheat	cytosol	22.28	25.5
TraesCS7B01G256300.1	Wheat	mitochondrion, plastid	22.03	24.59
TraesCS1B01G216500.1	Wheat	plastid	21.29	23.24
Os02t0599151-00	Rice	vacuole	41.83	22.99
TraesCS5B01G082500.1	Wheat	cytosol	21.29	22.45
TraesCS1B01G095600.1	Wheat	cytosol	21.04	22.14
TraesCS5B01G179300.1	Wheat	cytosol, nucleus, peroxisome	19.55	21.94
Os02t0599200-01	Rice	cytosol, peroxisome	14.6	12.8
TraesCS3B01G378000.1	Wheat	cytosol	18.56	11.47

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF323	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS4B01G184100
EnsemblPlants:TraesCS4B01G184100.1	TIGR:cd00143	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:-:403270298..403275106

Molecular Weight (calculated)

44605.3 Da

IEP (calculated)

4.960

GRAVY (calculated)

-0.532

Length

404 amino acids

Sequence
(BLAST)

001: MVFILKSFRK ANPAMGDATT KCSAGEENDR IKYAMSSMKG FRDEMEDALT AVLDLDGYSS TSFFGVYDGH GGADVALYCS RQFHIELTKE PDYGNNLRTA
101: LEHVYFRIDK KLKRSDEWKR EPAHPPVNRT WKNLLRAALC DPKERYVPPL QEGTTACVAL IRGNQIIVGN IGDSRCVLSR NGQANDLSTD HKPDHQQERA
201: RIERAGGQVT RDENPQRDIT GRLVSMDLGI HRIGGKLAIS RAIGDFQYKQ NKTLSPAEQI VTCSPDIRTV DITDDTEFLI IASDGIWDVK SSQEAVDFVR
301: QRLQSGETNL RAICERLLDS CLGRRMSDNM SVIVVEFKAG ARANPTATAE ARADEIEVNI EVGQSSSANV EGGQPSNGND DDDGSVNGCI GCFGRLDMFE
401: AGED

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.