Factsheet for TraesCS4D01G185200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G184100.1	Wheat	mitochondrion	96.27	95.79
TraesCS4A01G120800.1	Wheat	cytosol	90.3	95.78
HORVU4Hr1G053970.1	Barley	mitochondrion, nucleus, plastid	83.83	78.74
Os02t0606900-01	Rice	cytosol	42.54	50.29
TraesCS7D01G513700.1	Wheat	mitochondrion	44.53	43.13
TraesCS2D01G354600.1	Wheat	cytosol	39.05	40.78
KXG30563	Sorghum	mitochondrion	38.06	37.32
TraesCS6D01G137200.1	Wheat	golgi	35.32	36.22
TraesCS7D01G492000.1	Wheat	nucleus	35.57	34.79
Os02t0600033-00	Rice	cytoskeleton, cytosol, nucleus	39.8	34.19
TraesCS5D01G369200.1	Wheat	cytosol	32.09	33.86
Os02t0599150-01	Rice	cytosol	42.54	32.82
Os02t0598500-00	Rice	cytosol	42.54	32.82
Os02t0599700-01	Rice	nucleus, peroxisome, plastid	16.67	30.18
Os02t0607500-00	Rice	vacuole	43.03	29.78
TraesCS7D01G144400.3	Wheat	cytosol	22.39	25.5
TraesCS7D01G351600.1	Wheat	cytosol, plastid	21.89	24.04
Os02t0599151-00	Rice	vacuole	42.79	23.4
TraesCS1D01G205700.1	Wheat	plastid	21.14	22.97
TraesCS5D01G089900.1	Wheat	cytosol	21.64	22.77
TraesCS1D01G079600.1	Wheat	cytosol	21.39	22.51
TraesCS5D01G185900.1	Wheat	nucleus	19.9	22.22
Os02t0599200-01	Rice	cytosol, peroxisome	14.93	13.02
TraesCS3D01G203100.1	Wheat	cytosol	19.4	11.87

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF323	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS4D01G185200
EnsemblPlants:TraesCS4D01G185200.1	TIGR:cd00143	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:323114210..323118853

Molecular Weight (calculated)

44238.9 Da

IEP (calculated)

4.780

GRAVY (calculated)

-0.473

Length

402 amino acids

Sequence
(BLAST)

001: MVFILKSFRK ANPAMSDATT KCSAGEENDR IKYATSSMKG FRDEMEDALT AVLDLDGYSS TSFFGVYDGH GGADVALYCS RQFHIELTKE PDYGNNLRTA
101: LEHVYFRIDK KLKRSDEWKR EPADPPVNRT LKNLLRAALC EERYVPPLQE GTTACVALIR GNQIIVGNIG DSRCVLSRNG QANDLSTDHK PDLQQERERI
201: VRAGGQVTRD ENPQRDITGR LVSVDLGIHR IGGKLAISRA IGDFQFKKNK ALSPAEQIVT CSPDIRTVDI TDDTEFLIIA SDGIWDVKSS QEAVDFVRQR
301: LQSGETDLRA ICERLLDSCL GRRMSDNMSV IVVQFKAGAR ANPTATAEAR ADEIEVNIEV GQSSSANVEG GQPSNGNEDD DGSVNGCIGC FGRLDMFEAG
401: ED

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.