Factsheet for TraesCS5D01G089900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G082500.1	Wheat	cytosol	98.95	98.69
TraesCS5A01G076600.1	Wheat	cytosol	98.43	97.92
HORVU5Hr1G020300.3	Barley	plastid	86.13	85.01
Os01t0295700-01	Rice	cytosol	80.1	80.53
Zm00001d008171_P001	Maize	cytosol	73.04	70.45
EES02832	Sorghum	cytosol	73.82	70.32
TraesCS1D01G079600.1	Wheat	cytosol	69.37	69.37
GSMUA_AchrUn_...	Banana	cytosol	52.62	68.14
Solyc01g068000.2.1	Tomato	cytosol	58.64	63.64
PGSC0003DMT400018825	Potato	cytosol	58.64	63.64
Solyc06g009390.2.1	Tomato	cytosol	58.64	63.64
PGSC0003DMT400013370	Potato	cytosol	58.12	63.07
KRH31749	Soybean	cytosol	63.61	61.36
VIT_07s0005g02110.t01	Wine grape	cytosol	62.04	60.15
KRH69165	Soybean	cytosol	61.78	59.6
CDY11411	Canola	cytosol	54.97	56.15
Bra007669.1-P	Field mustard	cytosol	54.97	56.15
CDY37787	Canola	cytosol	53.93	56.13
CDX76624	Canola	cytosol	54.71	55.73
CDX93981	Canola	cytosol	54.71	55.59
KRH02420	Soybean	cytosol	55.24	55.53
AT3G62260.2	Thale cress	cytosol	54.97	54.69
KRH50630	Soybean	cytosol	54.97	54.4
VIT_05s0020g00390.t01	Wine grape	plastid	54.71	53.59
CDX93640	Canola	cytosol	51.83	52.8
Bra018701.1-P	Field mustard	cytosol	51.83	52.8
CDY20937	Canola	cytosol	51.31	52.55
AT1G48040.1	Thale cress	cytosol	52.09	51.96
KRH36917	Soybean	cytosol	54.97	51.85
PGSC0003DMT400069839	Potato	cytosol	49.21	47.0
TraesCS1D01G205700.1	Wheat	plastid	45.29	46.76
AT3G17250.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	51.05	46.21
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	49.48	45.99
CDX95863	Canola	golgi, mitochondrion	49.74	45.35
TraesCS7D01G144400.3	Wheat	cytosol	39.53	42.78
TraesCS7D01G351600.1	Wheat	cytosol, plastid	39.53	41.26
CDX92122	Canola	mitochondrion	36.39	41.12
Bra014405.1-P	Field mustard	cytosol	47.64	38.97
Bra022205.1-P	Field mustard	mitochondrion	26.18	37.88
CDY66303	Canola	plastid	53.14	32.17
TraesCS5D01G369200.1	Wheat	cytosol	27.49	27.56
TraesCS5D01G185900.1	Wheat	nucleus	24.08	25.56
TraesCS6D01G137200.1	Wheat	golgi	23.82	23.21
TraesCS7D01G492000.1	Wheat	nucleus	24.61	22.87
TraesCS4D01G185200.1	Wheat	mitochondrion	22.77	21.64
TraesCS7D01G513700.1	Wheat	mitochondrion	22.25	20.48
TraesCS2D01G354600.1	Wheat	cytosol	19.9	19.74
TraesCS3D01G203100.1	Wheat	cytosol	27.75	16.13

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF376	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
EnsemblPlantsGene:TraesCS5D01G089900	EnsemblPlants:TraesCS5D01G089900.1	TIGR:cd00143	SEG:seg	:	:

Description

No Description!

Coordinates

chr5D:-:97056510..97059096

Molecular Weight (calculated)

42176.3 Da

IEP (calculated)

4.683

GRAVY (calculated)

-0.176

Length

382 amino acids

Sequence
(BLAST)

001: MVAGPEVMHQ VVPMLEASFR RCPVRGVEEV VVGVGVSSPP LPVDSQSQVD LEVPDLVKTP LETLQFVPKI RSGSFADIGP RRYMEDEHIR IDNLSGHLGS
101: LLLCPSPNAF YGVFDGHGGS DAAAYMKRHA MRLFFEDSEF PEGLQEDDFF SESVANSIRK AFLSADLALA DDSVISRSSG TTALTALIFG RQLLVANAGD
201: CRAVLCRKGM AMEMSRDHRP TYEAERQRVT ECGGYIEDGY LNGVLSVTRA LGDWDMKMPQ GSQSPLIAEP EFQQTILTED DEFLIIGCDG IWDVMTSQQA
301: VTLVRKGLRR HDDPERCARE LAMEAKRLQT FDNLTVIVIC FASELGGCLR SSEEASSRRI RSCKSLSAEA LCNLRRLLES DQ

Best Arabidopsis Sequence Match ( AT1G48040.1 )
(BLAST)

001: MILSQTMVAE AEIRVLDVKC HISAPKDQKN FQIDEVRVSE SVRAEISGSA ETPRFGSGMS CVTTTIGESA SDFIPTIRSG SFADIRSRET MEDEHICIDD
101: LSAHLGSYNF SVPSAFYGVF DGHGGPEAAI FMKENLTRLF FQDAVFPEMP SIVDAFFLEE LENSHRKAFA LADLAMADET IVSGSCGTTA LTALIIGRHL
201: LVANAGDCRA VLCRRGVAVD MSFDHRSTYE PERRRIEDLG GYFEDGYLNG VLAVTRAIGD WELKNPFTDS SSPLISDPEI GQIILTEDDE FLILACDGIW
301: DVLSSQNAVS NVRQGLRRHG DPRQCAMELG KEAARLQSSD NMTVIVICFS SVPSSPKQPQ RRRLRFCVSD EARARLQAML AGE

Arabidopsis Description

Probable protein phosphatase 2C 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.