Factsheet for Solyc05g053290.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 2
cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, secretory
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069839	Potato	cytosol	94.89	97.5
Solyc01g068000.2.1	Tomato	cytosol	48.91	57.1
GSMUA_AchrUn_...	Banana	cytosol	40.15	55.93
Solyc06g009390.2.1	Tomato	cytosol	47.69	55.68
KRH50630	Soybean	cytosol	52.07	55.44
KRH02420	Soybean	cytosol	50.61	54.74
KRH36917	Soybean	cytosol	53.53	54.32
VIT_05s0020g00390.t01	Wine grape	plastid	50.85	53.59
AT1G48040.1	Thale cress	cytosol	48.66	52.22
CDY20937	Canola	cytosol	46.23	50.94
CDX93640	Canola	cytosol	46.47	50.93
Bra018701.1-P	Field mustard	cytosol	46.47	50.93
GSMUA_Achr10P...	Banana	cytosol	49.39	50.75
Zm00001d008171_P001	Maize	cytosol	48.66	50.51
Os05t0134200-01	Rice	cytosol	47.45	50.13
TraesCS1D01G079600.1	Wheat	cytosol	46.23	49.74
HORVU1Hr1G016640.2	Barley	cytosol	46.23	49.74
Os01t0295700-01	Rice	cytosol	45.99	49.74
GSMUA_Achr8P22250_001	Banana	cytosol	44.53	49.59
TraesCS1B01G095600.1	Wheat	cytosol	46.23	49.48
TraesCS5D01G089900.1	Wheat	cytosol	45.99	49.48
TraesCS5B01G082500.1	Wheat	cytosol	45.99	49.35
TraesCS5A01G076600.1	Wheat	cytosol	45.99	49.22
TraesCS1A01G077500.1	Wheat	cytosol	45.99	49.22
GSMUA_Achr3P08410_001	Banana	cytosol	48.66	49.02
EES02832	Sorghum	cytosol	47.69	48.88
EES17660	Sorghum	cytosol, peroxisome, plastid	47.45	48.63
HORVU5Hr1G020300.3	Barley	plastid	45.26	48.06
Zm00001d024732_P001	Maize	cytosol	46.72	47.41
AT3G17250.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	47.93	46.68
Solyc04g082600.2.1	Tomato	cytosol	40.39	43.12
CDX95863	Canola	golgi, mitochondrion	43.31	42.48
Solyc12g010450.1.1	Tomato	cytosol, nucleus, peroxisome	30.41	39.56
CDX92122	Canola	mitochondrion	32.12	39.05
Solyc06g065610.2.1	Tomato	plastid	34.06	37.33
Solyc02g082490.2.1	Tomato	cytosol	34.79	37.24
Bra022205.1-P	Field mustard	mitochondrion	23.36	36.36
Solyc07g007220.2.1	Tomato	nucleus	33.33	35.77
Solyc12g042570.1.1	Tomato	nucleus	20.68	25.45
Solyc03g118890.2.1	Tomato	cytosol, nucleus, peroxisome	18.25	24.75
Solyc08g006060.2.1	Tomato	cytosol	20.44	24.71
Solyc08g074230.1.1	Tomato	cytosol, nucleus, peroxisome	13.63	20.66
Solyc01g056690.2.1	Tomato	cytosol	22.38	14.09

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	UniProt:K4C209	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF316
SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:Solyc05g053290.2	EnsemblPlants:Solyc05g053290.2.1	UniParc:UPI00027662FE
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5:+:63422370..63424958

Molecular Weight (calculated)

44753.6 Da

IEP (calculated)

4.502

GRAVY (calculated)

-0.109

Length

411 amino acids

Sequence
(BLAST)

001: MIVKNSTAAA KMVVVDAEIL CQPNVSVEYI GVSTAAPVVG DEDLDFFDVS ATATSSSLTK SREFRSADLV SVDISLSDSG VRCSTNTQTT IIDSARSSNV
101: IPAIRSGSYT DIGPRRSNED EHIRVDDLSA QLGSLYNWPL PGAFYAVFDG HGGSDAAAYV RTNAMRFFFE DANLPQTSIV DQAFLEELES SHFRAFLIAD
201: QALADECSVD AYCGTTAITA LVLGRHLVIA NAGDCRAVLC RKGVAVQLSQ DHRPTCLAER QRVEKLGGII EYGCLNGDLA ITRALGDWYM KLPFGSASPL
301: TAEPEVQQLL LTEDDEFMIL GCDGIWDVMS NQDAVNVVRH ELRLHNDPQQ SARELVNQAL CKDTDDNLTA IVVCFTSPDH RTSVPSQRPR FRCCNLSEDA
401: RKKLQSLLGS N

Best Arabidopsis Sequence Match ( AT3G62260.2 )
(BLAST)

001: MVAEAEVVFQ QSLPAVLEIE LFDGVSSAVK SPVSSPKLGF TQSTASVSGS LTTSPVQADI FPEGDCDPSV LDYIPTIRSG SFADIGPKRN MEDEHIRIDD
101: LSSQVGSLFE LPKPSAFYAV FDGHGGPEAA AYVRENAIRF FFEDEQFPQT SEVSSVYVEE VETSLRNAFL QADLALAEDC SISDSCGTTA LTALICGRLL
201: MVANAGDCRA VLCRKGRAID MSEDHKPINL LERRRVEESG GFITNDGYLN EVLAVTRALG DWDLKLPHGS QSPLISEPEI KQITLTEDDE FLVIGCDGIW
301: DVLTSQEAVS IVRRGLNRHN DPTRCARELV MEALGRNSFD NLTAVVVCFM TMDRGDKPVV PLEKRRCFSL SPEAFCSLRN LLDG

Arabidopsis Description

Probable protein phosphatase 2C 49 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.