Factsheet for Bra022205.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
vacuole 1
nucleus 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92122	Canola	mitochondrion	68.56	53.55
AT3G17250.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	77.65	48.58
Bra018701.1-P	Field mustard	cytosol	51.89	36.53
GSMUA_AchrUn_...	Banana	cytosol	31.06	27.8
KRH36917	Soybean	cytosol	42.42	27.65
Bra007669.1-P	Field mustard	cytosol	38.64	27.27
KRH02420	Soybean	cytosol	39.02	27.11
KRH50630	Soybean	cytosol	39.39	26.94
TraesCS5B01G082500.1	Wheat	cytosol	38.26	26.37
TraesCS5D01G089900.1	Wheat	cytosol	37.88	26.18
GSMUA_Achr8P22250_001	Banana	cytosol	36.36	26.02
Os01t0295700-01	Rice	cytosol	37.12	25.79
TraesCS5A01G076600.1	Wheat	cytosol	37.5	25.78
GSMUA_Achr10P...	Banana	cytosol	39.02	25.75
GSMUA_Achr3P08410_001	Banana	cytosol	39.02	25.25
Os05t0134200-01	Rice	cytosol	37.12	25.19
HORVU5Hr1G020300.3	Barley	plastid	36.36	24.81
HORVU1Hr1G016640.2	Barley	cytosol	35.61	24.61
TraesCS1A01G077500.1	Wheat	cytosol	35.61	24.48
TraesCS1B01G095600.1	Wheat	cytosol	35.61	24.48
TraesCS1D01G079600.1	Wheat	cytosol	35.23	24.35
PGSC0003DMT400069839	Potato	cytosol	35.98	23.75
Zm00001d008171_P001	Maize	cytosol	35.61	23.74
EES17660	Sorghum	cytosol, peroxisome, plastid	35.98	23.69
EES02832	Sorghum	cytosol	35.98	23.69
Bra036796.1-P	Field mustard	nucleus	28.03	23.49
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	36.36	23.36
Zm00001d024732_P001	Maize	cytosol	35.61	23.21
Bra007784.1-P	Field mustard	nucleus	32.95	22.19
VIT_05s0020g00390.t01	Wine grape	plastid	32.58	22.05
Bra038901.1-P	Field mustard	nucleus	28.79	21.29
Bra005481.1-P	Field mustard	cytosol	29.17	20.48
Bra021870.1-P	Field mustard	endoplasmic reticulum	29.55	19.45
Bra014405.1-P	Field mustard	cytosol	33.71	19.06
Bra032043.1-P	Field mustard	nucleus	18.56	13.46
Bra007820.1-P	Field mustard	nucleus	17.8	12.63
Bra025933.1-P	Field mustard	cytosol	17.05	11.78
Bra023979.1-P	Field mustard	cytosol	15.91	11.2
Bra000209.1-P	Field mustard	cytosol	22.35	9.01

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	EnsemblPlantsGene:Bra022205	EnsemblPlants:Bra022205.1
EnsemblPlants:Bra022205.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:M4E0A8	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF165	SMART:SM00332	SUPFAM:SSF81606	SignalP:SignalP-noTM
UniParc:UPI0002547618	SEG:seg	:	:	:	:

Description

AT3G17250 (E=2e-061) | protein phosphatase 2C-related / PP2C-related

Coordinates

chrA05:+:19094590..19096024

Molecular Weight (calculated)

29630.8 Da

IEP (calculated)

6.521

GRAVY (calculated)

-0.094

Length

264 amino acids

Sequence
(BLAST)

001: MRASRASSLT QKWLLLTQLC LLKDLVIRCV RQFIRRAKAM LLSQNVVVVE PAEISVVVDV KSSQQDLNSF QIAQVRIRDS VCIEIPVPEE TPLLGSQGGK
101: AVDMSFDHKS TFELERRRVE ELGGYFEGEY IYGELAVTRA LGDWSLKRYS SLGGSLSPLI SDPEIKQVVL TEEDEFLIMG CDGVWDVMTS QYAVTFARQG
201: LRRHGDPRRC AMELGREAFR LNSADNVTVL VICFTSSSST PQRRRIQFCV SDEARASLQA MLQG

Best Arabidopsis Sequence Match ( AT3G17250.1 )
(BLAST)

001: MRTSKASVTQ TWLLYTQLCL WKDLIIRYVR QIIRRAKSML FSQNMVADSA EISVIDVKSH LSVAKDPSNF QIAEIRIHDS ICIDIPSSEE TPLLESIKSC
101: SATTIEEHVT EFVPNISSGS YADKGDYREY MEDEHICIDD LSDHLGSSFY RFPVPMAFYG VFDGHGGSDA SQYIKENAMS LFFEDAVFRQ SPSVVDSLFL
201: KELETSHREA YRLADLAMED ERIVSSSCGT TALTALVIGR HLMVANVGDC RAVLCRKGKA VDMSFDHKST FEPERRRVED LGGYFEGEYL YGDLAVTRAL
301: GDWSIKRFSP LGESLSPLIS DPDIQQMILT EEDEFLIMGC DGVWDVMTSQ YAVTFVRQGL RRHGDPRRCA MELGREALRL DSSDNVTVVV ICFSSSPAPQ
401: RRRIRFCVSD EARARLQTML EG

Arabidopsis Description

Probable protein phosphatase 2C 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUU7]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.