Factsheet for Bra014405.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66303	Canola	plastid	100.0	74.01
Bra007669.1-P	Field mustard	cytosol	55.46	69.25
AT3G62260.2	Thale cress	cytosol	50.11	60.94
GSMUA_AchrUn_...	Banana	cytosol	37.69	59.66
GSMUA_Achr8P22250_001	Banana	cytosol	38.54	48.78
Os01t0295700-01	Rice	cytosol	39.4	48.42
Os05t0134200-01	Rice	cytosol	40.04	48.07
TraesCS5D01G089900.1	Wheat	cytosol	38.97	47.64
TraesCS5B01G082500.1	Wheat	cytosol	38.97	47.52
TraesCS5A01G076600.1	Wheat	cytosol	38.97	47.4
HORVU1Hr1G016640.2	Barley	cytosol	38.54	47.12
GSMUA_Achr10P...	Banana	cytosol	40.26	47.0
TraesCS1A01G077500.1	Wheat	cytosol	38.54	46.88
TraesCS1D01G079600.1	Wheat	cytosol	38.33	46.86
Zm00001d008171_P001	Maize	cytosol	39.61	46.72
TraesCS1B01G095600.1	Wheat	cytosol	38.33	46.61
HORVU5Hr1G020300.3	Barley	plastid	38.54	46.51
EES17660	Sorghum	cytosol, peroxisome, plastid	39.83	46.38
GSMUA_Achr3P08410_001	Banana	cytosol	40.47	46.32
Zm00001d024732_P001	Maize	cytosol	39.83	45.93
EES02832	Sorghum	cytosol	39.4	45.89
Bra018701.1-P	Field mustard	cytosol	35.76	44.53
Bra036796.1-P	Field mustard	nucleus	29.98	44.44
Bra005481.1-P	Field mustard	cytosol	32.55	40.43
Bra038901.1-P	Field mustard	nucleus	30.41	39.78
Bra021870.1-P	Field mustard	endoplasmic reticulum	31.69	36.91
Bra007784.1-P	Field mustard	nucleus	29.55	35.2
Bra022205.1-P	Field mustard	mitochondrion	19.06	33.71
Bra007820.1-P	Field mustard	nucleus	19.06	23.92
Bra032043.1-P	Field mustard	nucleus	18.42	23.63
Bra023979.1-P	Field mustard	cytosol	18.84	23.47
Bra025933.1-P	Field mustard	cytosol	17.56	21.47
Bra000209.1-P	Field mustard	cytosol	18.63	13.28

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra014405	EnsemblPlants:Bra014405.1
EnsemblPlants:Bra014405.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M4DD37
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF519	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI0002543828	SEG:seg	:	:	:	:

Description

AT3G62260 (E=2e-110) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA04:+:348169..351636

Molecular Weight (calculated)

51337.4 Da

IEP (calculated)

4.886

GRAVY (calculated)

0.001

Length

467 amino acids

Sequence
(BLAST)

001: MEDEHICVDD LSSQVSCLSQ LPNPSAFYAV FDGHGGSEAA TYVKQNAIRL FFEDEKFPQT SEVNNSVYVE EVRSSLRNAF LQADLALAED CSISSSSGTT
101: ALAALISGRL LMVANAGDCR AVLCRKGRAI EMSHDHRPIN LLERRRVEKS GGVFEDGYLN GELSVTRALG DWDMKRTPRG SSKSPLISEP EIKQTTLTED
201: DEFLVMACDG IWDVLTSQEA VSIVKRGLNR HDDPGRCARE LVMEALRLNT FDNLTAVVVS FVTGERVVPL EKKRCFGLTP EAFRSLRIFR PDELSALISS
301: FKPSHRTAGL IFSLRSIATS DLLLHHLSVP VTDSSILDSL CFPSSPSPSI IAAPLTVLYF GLICKEVAKV VPAQTLAATN LADQELTETM QKLLIVMQRL
401: DDKIGLMLES DGELFNRSMS SKLISGDSDF FANLVCFHFS SLCSQSISAI EFPSRLWDPF IISCNSG

Best Arabidopsis Sequence Match ( AT3G62260.1 )
(BLAST)

001: MVAEAEVVFQ QSLPAVLEIE LFDGVSSAVK SPVSSPKLGF TQSTASVSGS LTTSPVADIF PEGDCDPSVL DYIPTIRSGS FADIGPKRNM EDEHIRIDDL
101: SSQVGSLFEL PKPSAFYAVF DGHGGPEAAA YVRENAIRFF FEDEQFPQTS EVSSVYVEEV ETSLRNAFLQ ADLALAEDCS ISDSCGTTAL TALICGRLLM
201: VANAGDCRAV LCRKGRAIDM SEDHKPINLL ERRRVEESGG FITNDGYLNE VLAVTRALGD WDLKLPHGSQ SPLISEPEIK QITLTEDDEF LVIGCDGIWD
301: VLTSQEAVSI VRRGLNRHND PTRCARELVM EALGRNSFDN LTAVVVCFMT MDRGDKPVVP LEKRRCFSLS PEAFCSLRNL LDG

Arabidopsis Description

Probable protein phosphatase 2C 49 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.