Factsheet for Bra021870.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion, nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37699	Canola	cytosol	95.26	98.96
AT2G33700.1	Thale cress	cytosol	84.79	89.47
Bra005481.1-P	Field mustard	cytosol	83.79	89.36
GSMUA_Achr11P...	Banana	plastid	63.84	68.82
Bra036796.1-P	Field mustard	nucleus	53.37	67.94
GSMUA_Achr4P25900_001	Banana	cytosol	63.09	66.23
GSMUA_Achr9P23890_001	Banana	plastid	61.85	66.13
GSMUA_Achr5P11730_001	Banana	cytosol, mitochondrion, nucleus	63.09	66.06
Bra038901.1-P	Field mustard	nucleus	56.86	63.87
TraesCS1A01G202300.1	Wheat	plastid	58.85	63.78
TraesCS1B01G216500.1	Wheat	plastid	58.35	63.24
TraesCS1D01G205700.1	Wheat	plastid	58.1	62.97
Zm00001d000391_P002	Maize	plastid	57.61	62.1
KXG39006	Sorghum	plastid	57.11	61.56
Zm00001d029772_P001	Maize	plastid	57.11	61.07
HORVU1Hr1G052160.1	Barley	plastid	58.35	58.65
GSMUA_AchrUn_...	Banana	cytosol	64.59	57.68
Bra007784.1-P	Field mustard	nucleus	44.39	45.41
Bra007669.1-P	Field mustard	cytosol	41.9	44.92
Bra018701.1-P	Field mustard	cytosol	36.91	39.47
Bra014405.1-P	Field mustard	cytosol	36.91	31.69
Bra022205.1-P	Field mustard	mitochondrion	19.45	29.55
Bra007820.1-P	Field mustard	nucleus	24.69	26.61
Bra032043.1-P	Field mustard	nucleus	23.94	26.37
Bra025933.1-P	Field mustard	cytosol	24.94	26.18
Bra023979.1-P	Field mustard	cytosol	24.19	25.87
Bra000209.1-P	Field mustard	cytosol	26.18	16.03

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	MapMan:18.4.24.2.7	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra021870
EnsemblPlants:Bra021870.1	EnsemblPlants:Bra021870.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457
UniProt:M4DZC3	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF528	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	SignalP:SignalP-noTM	UniParc:UPI00025436E5	:	:	:

Description

AT2G33700 (E=2e-193) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA04:+:14956108..14958175

Molecular Weight (calculated)

44360.2 Da

IEP (calculated)

4.943

GRAVY (calculated)

-0.166

Length

401 amino acids

Sequence
(BLAST)

001: MVVRSIISEL LFVIYMIEKS SADGMDFSPL ITVLEGDFNM EKASAVETDT LDDSTKQMSK GKPPRHISSM QHITSTTTSR LQDVDVCSLV MKSPDEKSEF
101: LPVYRSGSCA EQGAKQFMED EHICIDDLVE HLGASVDFSS LGAFYGVFDG HGGTDAALFV RKNILRYIVE DSYFPLCVKK AIKNAFLKAD YEFADDSSLD
201: ISSGTTALTA FIFGRRLIIA NAGDCRAVLG RRGRAIELSK DHKPNCIAEK VRIEKLGGVV YDGYLNGQLS VARAIGDWHM KGPKGSACPL SPEPELQETD
301: LSEEDEFLIM GCDGLWDVMS SQCAVTIARK ELMIHNDPER CSRELVREAL KRNTCDNLTV IVVCFSPDPP QRIEIRMQSR VRRSISAEGL NLLKGVLDGY
401: P

Best Arabidopsis Sequence Match ( AT2G33700.1 )
(BLAST)

001: MSMDFSPLLT VLEGDFNKDN TSSATEIDTL ENLDDTRQIS KGKPPRHLTS SATRLQLAAN ADVDVCNLVM KSLDDKSEFL PVYRSGSCAE QGAKQFMEDE
101: HICIDDLVNH LGAAIQCSSL GAFYGVFDGH GGTDAAHFVR KNILRFIVED SSFPLCVKKA IKSAFLKADY EFADDSSLDI SSGTTALTAF IFGRRLIIAN
201: AGDCRAVLGR RGRAIELSKD HKPNCTAEKV RIEKLGGVVY DGYLNGQLSV ARAIGDWHMK GPKGSACPLS PEPELQETDL SEDDEFLIMG CDGLWDVMSS
301: QCAVTIARKE LMIHNDPERC SRELVREALK RNTCDNLTVI VVCFSPDPPQ RIEIRMQSRV RRSISAEGLN LLKGVLDGYP

Arabidopsis Description

PP2C27Probable protein phosphatase 2C 27 [Source:UniProtKB/Swiss-Prot;Acc:P93006]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.