Skip to main content
crop-pal logo
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93640 Canola cytosol 99.47 99.47
AT1G48040.1 Thale cress cytosol 86.13 84.33
GSMUA_AchrUn_... Banana cytosol 42.93 54.58
KRH02420 Soybean cytosol 54.4 53.68
KRH50630 Soybean cytosol 54.67 53.11
VIT_05s0020g00390.t01 Wine grape plastid 54.93 52.82
KRH36917 Soybean cytosol 56.8 52.59
Bra022205.1-P Field mustard mitochondrion 36.53 51.89
TraesCS5D01G089900.1 Wheat cytosol 52.8 51.83
TraesCS5A01G076600.1 Wheat cytosol 53.07 51.82
TraesCS5B01G082500.1 Wheat cytosol 52.53 51.44
Os05t0134200-01 Rice cytosol 52.8 50.9
Os01t0295700-01 Rice cytosol 51.2 50.53
GSMUA_Achr8P22250_001 Banana cytosol 49.6 50.41
Bra007669.1-P Field mustard cytosol 50.13 50.27
HORVU5Hr1G020300.3 Barley plastid 51.73 50.13
HORVU1Hr1G016640.2 Barley cytosol 50.93 50.0
TraesCS1B01G095600.1 Wheat cytosol 51.2 50.0
TraesCS1D01G079600.1 Wheat cytosol 50.67 49.74
TraesCS1A01G077500.1 Wheat cytosol 50.67 49.48
GSMUA_Achr3P08410_001 Banana cytosol 53.33 49.02
GSMUA_Achr10P... Banana cytosol 52.27 49.0
Zm00001d008171_P001 Maize cytosol 51.47 48.74
EES17660 Sorghum cytosol, peroxisome, plastid 52.0 48.63
EES02832 Sorghum cytosol 50.93 47.63
PGSC0003DMT400069839 Potato cytosol 50.4 47.25
Solyc05g053290.2.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 50.93 46.47
Zm00001d024732_P001 Maize cytosol 50.13 46.42
Bra036796.1-P Field mustard nucleus 37.6 44.76
Bra005481.1-P Field mustard cytosol 40.27 40.16
Bra038901.1-P Field mustard nucleus 37.87 39.78
Bra021870.1-P Field mustard endoplasmic reticulum 39.47 36.91
Bra007784.1-P Field mustard nucleus 37.87 36.22
Bra014405.1-P Field mustard cytosol 44.53 35.76
Bra032043.1-P Field mustard nucleus 26.4 27.2
Bra007820.1-P Field mustard nucleus 25.33 25.54
Bra023979.1-P Field mustard cytosol 25.33 25.33
Bra025933.1-P Field mustard cytosol 24.53 24.08
Bra000209.1-P Field mustard cytosol 24.53 14.05
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:15.5.38Gene3D:3.60.40.10EnsemblPlantsGene:Bra018701EnsemblPlants:Bra018701.1
EnsemblPlants:Bra018701.1-PGO:GO:0003674GO:GO:0003824GO:GO:0004721GO:GO:0004722GO:GO:0005488
GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016787
GO:GO:0019538GO:GO:0043169GO:GO:0046872InterPro:IPR001932InterPro:IPR036457UniProt:M4DQA8
PFAM:PF00481InterPro:PP2CInterPro:PP2C_BSInterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domScanProsite:PS01032
PFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF165SMART:SM00331SMART:SM00332SUPFAM:SSF81606
UniParc:UPI000253EDD2SEG:seg::::
Description
AT1G48040 (E=6e-173) | catalytic/ protein serine/threonine phosphatase
Coordinates
chrA06:+:2526152..2527824
Molecular Weight (calculated)
41376.6 Da
IEP (calculated)
4.599
GRAVY (calculated)
-0.200
Length
375 amino acids
Sequence
(BLAST)
001: MILSQPEIRV LDVKCHISSA AKEQNSFRVS ESVRAQTSDS AETPRFESGM SFATTSIEEP TIEFFPTIRS GSFADIRGRE TMEDEHICID DLSSQFRSLN
101: FSLPSAFYGV FDGHGGPEAS LYMKENLTRL FFQDSVFPEI PSVVDSFFLQ ELENSHRKAF ALADLAMADE SIVSGSCGTT ALTALIVGRH LLVANAGDCR
201: AVLCRRGVAV DMSFDHRSTY EPERRRIEDL GGYFEDGYLN GVLAVTRAIG DWELKSPFSG SSSSPLISDP DIQQIILTED DEFLILACDG IWDVLSSQNA
301: VSNVRQGLRR HGDPRQSAME LGKEAARLNS SDNLTVVVIC FSSVPASTQQ PQRRRLRFCV SDEARARLQA MLGGD
Best Arabidopsis Sequence Match ( AT1G48040.1 )
(BLAST)
001: MILSQTMVAE AEIRVLDVKC HISAPKDQKN FQIDEVRVSE SVRAEISGSA ETPRFGSGMS CVTTTIGESA SDFIPTIRSG SFADIRSRET MEDEHICIDD
101: LSAHLGSYNF SVPSAFYGVF DGHGGPEAAI FMKENLTRLF FQDAVFPEMP SIVDAFFLEE LENSHRKAFA LADLAMADET IVSGSCGTTA LTALIIGRHL
201: LVANAGDCRA VLCRRGVAVD MSFDHRSTYE PERRRIEDLG GYFEDGYLNG VLAVTRAIGD WELKNPFTDS SSPLISDPEI GQIILTEDDE FLILACDGIW
301: DVLSSQNAVS NVRQGLRRHG DPRQCAMELG KEAARLQSSD NMTVIVICFS SVPSSPKQPQ RRRLRFCVSD EARARLQAML AGE
Arabidopsis Description
Probable protein phosphatase 2C 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNF4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.