CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02420	Soybean	cytosol	94.56	96.05
KRH36917	Soybean	cytosol	83.16	79.26
GSMUA_AchrUn_...	Banana	cytosol	49.74	65.08
VIT_05s0020g00390.t01	Wine grape	plastid	61.92	61.28
GSMUA_Achr8P22250_001	Banana	cytosol	54.92	57.45
KRH31749	Soybean	cytosol	58.55	57.07
KRH69165	Soybean	cytosol	58.03	56.57
AT1G48040.1	Thale cress	cytosol	55.44	55.87
Os05t0134200-01	Rice	cytosol	55.96	55.53
Os01t0295700-01	Rice	cytosol	54.66	55.53
CDY20937	Canola	cytosol	53.63	55.5
HORVU1Hr1G016640.2	Barley	cytosol	54.66	55.24
TraesCS1D01G079600.1	Wheat	cytosol	54.66	55.24
GSMUA_Achr10P...	Banana	cytosol	56.99	55.0
TraesCS5D01G089900.1	Wheat	cytosol	54.4	54.97
TraesCS1A01G077500.1	Wheat	cytosol	54.66	54.95
TraesCS1B01G095600.1	Wheat	cytosol	54.66	54.95
GSMUA_Achr3P08410_001	Banana	cytosol	58.03	54.9
Bra018701.1-P	Field mustard	cytosol	53.11	54.67
CDX93640	Canola	cytosol	53.11	54.67
TraesCS5B01G082500.1	Wheat	cytosol	54.15	54.57
TraesCS5A01G076600.1	Wheat	cytosol	53.89	54.17
EES17660	Sorghum	cytosol, peroxisome, plastid	55.96	53.87
Zm00001d008171_P001	Maize	cytosol	55.18	53.79
PGSC0003DMT400069839	Potato	cytosol	54.92	53.0
EES02832	Sorghum	cytosol	54.66	52.62
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	55.44	52.07
HORVU5Hr1G020300.3	Barley	plastid	51.55	51.42
Zm00001d024732_P001	Maize	cytosol	53.89	51.36
KRH62979	Soybean	cytosol	21.24	50.93
AT3G17250.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	52.85	48.34
CDX95863	Canola	golgi, mitochondrion	49.22	45.35
KRH51582	Soybean	cytosol	43.01	43.12
CDX92122	Canola	mitochondrion	37.31	42.6
KRH20243	Soybean	cytosol	41.71	42.04
KRH28935	Soybean	nucleus	40.41	41.71
KRH03568	Soybean	cytosol	41.19	41.51
KRH76528	Soybean	cytosol	40.16	41.44
KRH60899	Soybean	cytosol	34.72	40.61
KRH37886	Soybean	cytosol	39.64	40.16
KRH12874	Soybean	cytosol	39.38	40.11
KRH52505	Soybean	cytosol	37.82	39.46
KRH61828	Soybean	cytosol	37.82	39.46
Bra022205.1-P	Field mustard	mitochondrion	26.94	39.39
KRH52312	Soybean	cytosol	24.87	27.83
KRH61653	Soybean	cytosol	9.59	27.21
KRH15637	Soybean	cytosol	23.32	26.55
KRH44580	Soybean	endoplasmic reticulum	24.35	25.54
KRH47317	Soybean	cytosol	24.35	25.54
KRH39122	Soybean	cytosol	21.24	25.23
KRH05380	Soybean	golgi	23.06	25.0
KRH61652	Soybean	cytosol	10.88	21.76
KRH48594	Soybean	cytosol, peroxisome, plastid	12.69	20.16
KRH71677	Soybean	cytosol	26.17	15.33

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100781949	MapMan:15.5.38	Gene3D:3.60.40.10	EMBL:ACUP02004709
EnsemblPlantsGene:GLYMA_07G233000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	UniProt:I1KMJ5	InterPro:IPR001932	InterPro:IPR036457
EnsemblPlants:KRH50630	ProteinID:KRH50630	ProteinID:KRH50630.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF316
SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00023387EC	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:41376704..41379386

Molecular Weight (calculated)

42551.9 Da

IEP (calculated)

4.820

GRAVY (calculated)

-0.056

Length

386 amino acids

Sequence
(BLAST)

001: MIVSQKVVAE AEIICQQNIP MLDVKYHICV AQEHNVKVEV SPKSSSPSLP IFGQAVSCSE IIKDSILEAP AMNLVPNVRS GSYAEMGPRV SMDDEHICID
101: DLGAQLGFVF KCPIPSAFYA VFDGHGGPDA AAFVKRNAMR LFFEDADMLQ SYDADAFFLQ KLEDSHRRAF LRADLALADE QTVSSSCGTT ALTALVLGRH
201: LLVANAGDCR AVLCRRGVAV EMSNDHRPSY LPEQRRVEEL GGFIDDGYLN GYLSVTRALG DWDLKFPLGA ASPLTAEPDV RLVTLTEDDE FLIIGCDGIW
301: DVMSSQVAVS LVRRGLRRHD DPQQCARELV KEALRLNTSD NLTVIVVYLS PIESIVESCP PQRRRFKTCS LSEEARNRLK SLIEGN

Best Arabidopsis Sequence Match ( AT1G48040.1 )
(BLAST)

001: MILSQTMVAE AEIRVLDVKC HISAPKDQKN FQIDEVRVSE SVRAEISGSA ETPRFGSGMS CVTTTIGESA SDFIPTIRSG SFADIRSRET MEDEHICIDD
101: LSAHLGSYNF SVPSAFYGVF DGHGGPEAAI FMKENLTRLF FQDAVFPEMP SIVDAFFLEE LENSHRKAFA LADLAMADET IVSGSCGTTA LTALIIGRHL
201: LVANAGDCRA VLCRRGVAVD MSFDHRSTYE PERRRIEDLG GYFEDGYLNG VLAVTRAIGD WELKNPFTDS SSPLISDPEI GQIILTEDDE FLILACDGIW
301: DVLSSQNAVS NVRQGLRRHG DPRQCAMELG KEAARLQSSD NMTVIVICFS SVPSSPKQPQ RRRLRFCVSD EARARLQAML AGE

Arabidopsis Description

Probable protein phosphatase 2C 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.