CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95863	Canola	golgi, mitochondrion	94.08	75.89
Bra022205.1-P	Field mustard	mitochondrion	53.55	68.56
AT3G17250.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	77.22	61.85
CDY20937	Canola	cytosol	55.92	50.67
CDX93640	Canola	cytosol	55.92	50.4
GSMUA_AchrUn_...	Banana	cytosol	32.84	37.63
KRH02420	Soybean	cytosol	42.01	37.37
KRH50630	Soybean	cytosol	42.6	37.31
KRH36917	Soybean	cytosol	44.38	37.04
GSMUA_Achr8P22250_001	Banana	cytosol	40.24	36.86
CDY11411	Canola	cytosol	40.53	36.63
CDX93981	Canola	cytosol	40.53	36.44
TraesCS5D01G089900.1	Wheat	cytosol	41.12	36.39
TraesCS5B01G082500.1	Wheat	cytosol	41.12	36.29
CDX76624	Canola	cytosol	40.24	36.27
GSMUA_Achr10P...	Banana	cytosol	42.6	36.0
TraesCS5A01G076600.1	Wheat	cytosol	40.83	35.94
VIT_05s0020g00390.t01	Wine grape	plastid	40.53	35.13
Os01t0295700-01	Rice	cytosol	39.35	35.0
CDY37787	Canola	cytosol	37.87	34.88
TraesCS1D01G079600.1	Wheat	cytosol	39.35	34.82
HORVU1Hr1G016640.2	Barley	cytosol	39.35	34.82
GSMUA_Achr3P08410_001	Banana	cytosol	42.01	34.8
Os05t0134200-01	Rice	cytosol	39.65	34.45
TraesCS1A01G077500.1	Wheat	cytosol	39.05	34.38
TraesCS1B01G095600.1	Wheat	cytosol	39.05	34.38
HORVU5Hr1G020300.3	Barley	plastid	39.35	34.37
Zm00001d008171_P001	Maize	cytosol	39.35	33.59
EES17660	Sorghum	cytosol, peroxisome, plastid	39.65	33.42
EES02832	Sorghum	cytosol	39.35	33.17
Zm00001d024732_P001	Maize	cytosol	39.65	33.09
PGSC0003DMT400069839	Potato	cytosol	38.76	32.75
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	39.05	32.12
CDY53789	Canola	cytosol	31.36	27.53
CDY17190	Canola	cytosol	30.18	27.2
CDY37699	Canola	cytosol	30.77	26.94
CDY27953	Canola	cytosol	29.88	26.44
CDY11515	Canola	mitochondrion	29.59	26.32
CDX76745	Canola	nucleus	30.18	26.02
CDY16304	Canola	nucleus	26.63	25.35
CDX73719	Canola	nucleus	26.92	25.21
CDX78007	Canola	nucleus	26.63	24.93
CDY33277	Canola	nucleus	26.04	24.65
CDY66303	Canola	plastid	38.76	20.76
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	12.72	19.46
CDX72331	Canola	cytosol	17.16	16.48
CDY13457	Canola	cytosol	17.16	16.48
CDX76775	Canola	nucleus	17.16	16.25
CDY53471	Canola	nucleus	17.46	16.21
CDY64720	Canola	nucleus	16.86	15.62
CDY64719	Canola	nucleus	16.86	15.62
CDY26191	Canola	cytosol	15.68	14.6
CDY34740	Canola	nucleus	16.57	14.14
CDY19191	Canola	cytosol, nucleus, peroxisome	15.68	13.49
CDY22485	Canola	cytosol	21.89	11.26
CDY35434	Canola	cytosol, plastid	21.6	11.11

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:A0A078DTB8	EnsemblPlants:CDX92122
ProteinID:CDX92122	ProteinID:CDX92122.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	EnsemblPlantsGene:GSBRNA2T00153818001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF165	SMART:SM00332	SUPFAM:SSF81606	SignalP:SignalP-noTM	UniParc:UPI0004EE6D9B
SEG:seg	:	:	:	:	:

Description

BnaA05g22850D

Coordinates

chrLK031871:-:359347..360928

Molecular Weight (calculated)

37961.4 Da

IEP (calculated)

5.701

GRAVY (calculated)

-0.117

Length

338 amino acids

Sequence
(BLAST)

001: MRASRASSLT QKWLLLTQLC LLKDLVIRCV RQFIRRAKAM LLSQNVVVVE PAEISVVVDV KSSQQDLNSF QIAQVRIRDS VCIEIPVPEE TPLLGSVKTC
101: SVTEEDVTEF VPKISSGSYA DKGSREYMED EHICIDDLSS HLPSSFFRFP LPVAFYGVFD GHGGSEASRY IKENATRLFF EDDVFRESHF VLNNFFLQEV
201: EKSHREAYRL ADLAMEDESI VSGSCGTTAL TALVIGRYLM VANVGDCRAV LCRGGKAVDM SFDHKSTFEL ERRRVEEHGD PRRCAMELGR EAFRLNSADN
301: VTVLVICFTS SSSTPQRRRI QFCVSDEARA SLQAMLQG

Best Arabidopsis Sequence Match ( AT3G17250.1 )
(BLAST)

001: MRTSKASVTQ TWLLYTQLCL WKDLIIRYVR QIIRRAKSML FSQNMVADSA EISVIDVKSH LSVAKDPSNF QIAEIRIHDS ICIDIPSSEE TPLLESIKSC
101: SATTIEEHVT EFVPNISSGS YADKGDYREY MEDEHICIDD LSDHLGSSFY RFPVPMAFYG VFDGHGGSDA SQYIKENAMS LFFEDAVFRQ SPSVVDSLFL
201: KELETSHREA YRLADLAMED ERIVSSSCGT TALTALVIGR HLMVANVGDC RAVLCRKGKA VDMSFDHKST FEPERRRVED LGGYFEGEYL YGDLAVTRAL
301: GDWSIKRFSP LGESLSPLIS DPDIQQMILT EEDEFLIMGC DGVWDVMTSQ YAVTFVRQGL RRHGDPRRCA MELGREALRL DSSDNVTVVV ICFSSSPAPQ
401: RRRIRFCVSD EARARLQTML EG

Arabidopsis Description

Probable protein phosphatase 2C 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUU7]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.