CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025933.1-P	Field mustard	cytosol	97.52	92.67
CDY19191	Canola	cytosol, nucleus, peroxisome	94.49	87.28
AT1G18030.1	Thale cress	cytosol, nucleus, peroxisome	81.27	84.05
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.56	76.47
GSMUA_Achr9P21740_001	Banana	cytosol, endoplasmic reticulum, peroxisome	58.4	67.09
KRH39122	Soybean	cytosol	57.85	64.62
Solyc03g118890.2.1	Tomato	cytosol, nucleus, peroxisome	51.79	62.05
VIT_17s0000g03100.t01	Wine grape	cytosol, peroxisome, plastid	64.19	61.64
PGSC0003DMT400014727	Potato	peroxisome	54.82	58.88
CDY16304	Canola	nucleus	26.17	26.76
CDY33277	Canola	nucleus	26.17	26.61
CDX73719	Canola	nucleus	26.45	26.59
CDX78007	Canola	nucleus	26.45	26.59
CDY37699	Canola	cytosol	27.27	25.65
CDY53789	Canola	cytosol	27.0	25.45
CDY27953	Canola	cytosol	26.72	25.39
CDY17190	Canola	cytosol	26.17	25.33
CDY20937	Canola	cytosol	25.9	25.2
CDX76775	Canola	nucleus	24.24	24.65
CDX93640	Canola	cytosol	25.34	24.53
CDY53471	Canola	nucleus	24.52	24.45
CDY13457	Canola	cytosol	23.14	23.86
CDX72331	Canola	cytosol	23.14	23.86
CDY64719	Canola	nucleus	23.97	23.84
CDY64720	Canola	nucleus	23.97	23.84
CDY11515	Canola	mitochondrion	24.79	23.68
CDY37787	Canola	cytosol	23.42	23.16
CDX93981	Canola	cytosol	23.97	23.14
CDY11411	Canola	cytosol	23.69	22.99
CDX76624	Canola	cytosol	23.69	22.93
CDX76745	Canola	nucleus	24.52	22.7
CDY34740	Canola	nucleus	24.24	22.22
CDX95863	Canola	golgi, mitochondrion	22.04	19.09
CDX92122	Canola	mitochondrion	14.6	15.68
CDY66303	Canola	plastid	23.42	13.47
CDY22485	Canola	cytosol	23.14	12.79
CDY35434	Canola	cytosol, plastid	22.59	12.48

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:A0A078GLH8	UniProt:A0A078GLH8
EnsemblPlants:CDY26191	ProteinID:CDY26191	ProteinID:CDY26191.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00034851001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF348	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0004EEE671	:	:	:	:

Description

BnaA06g12260DBnaA06g12260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLH8]

Coordinates

chrLK032186:-:186424..188589

Molecular Weight (calculated)

39537.1 Da

IEP (calculated)

6.628

GRAVY (calculated)

-0.317

Length

363 amino acids

Sequence
(BLAST)

001: MEKPNQNYAA DSFSSEDLIS PPPVKKAKKS EETGCDNTKD PKIPSGGEEV IPAVDNRAAE EGSSSCISEE KKKGFVVEAD VAEDKGARQA MEDVSLVLPD
101: ASLDFPGKLR CGHFAIYDGH GGRLAAEFAK KHLHLNVLSS GLPRELMDLK VAKKAILDGF RNTDELLLQE SVSVLTFVYG SGGWQDGATA VCVWIVDQKV
201: FIANIGDAKA VLARSSPTDE SGSHTEACNP LKAIVLTREH KAIYPQERSR IQKSGGVVSS NGRLQGRLEV SRAFGDRQFK KYGVIATPDI HAFELTERED
301: FMILGCDGLW EVFGPSDAVG FVQKLLKEGL PVSTISRRLV KEAVKERRCK DNCTAIVIVF KRG

Best Arabidopsis Sequence Match ( AT1G18030.1 )
(BLAST)

001: MLEKESDLTA MEKPNNKHAA DSFSSEDLVS PVKKAKKSEE VSGGGEAVAA VGNREAEEDK PSFVSEEKKE FLVEADVAED KGARHTMEDV WVVLPDASLD
101: FPGTLRCAHF AIYDGHGGRL AAEFAKKHLH LNVLSAGLPR ELLDVKVAKK AILEGFRKTD ELLLQKSVSG GWQDGATAVC VWILDQKVFV ANIGDAKAVL
201: ARSSTTNELG NHTEAGNPLK AIVLTREHKA IYPQERSRIQ KSGGVISSNG RLQGRLEVSR AFGDRHFKKF GVSATPDIHA FELTERENFM ILGCDGLWEV
301: FGPSDAVGFV QKLLKEGLHV STVSRRLVKE AVKERRCKDN CTAIVIVFKR V

Arabidopsis Description

Probable protein phosphatase 2C 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMT1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.