CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64720	Canola	nucleus	100.0	100.0
CDY53471	Canola	nucleus	96.99	97.25
CDX76775	Canola	nucleus	90.96	93.0
AT2G25070.2	Thale cress	nucleus	87.95	90.42
CDY13457	Canola	cytosol	78.63	81.53
CDX72331	Canola	cytosol	78.08	80.97
CDY34740	Canola	nucleus	86.3	79.55
KRH61652	Soybean	cytosol	40.0	75.65
KRH52312	Soybean	cytosol	70.68	74.78
KRH15637	Soybean	cytosol	69.04	74.34
GSMUA_Achr4P12780_001	Banana	cytosol	70.14	71.91
GSMUA_Achr10P...	Banana	cytosol	65.21	71.04
KRH05380	Soybean	golgi	69.04	70.79
Os02t0180000-01	Rice	cytosol, plasma membrane	69.32	69.89
EES04637	Sorghum	cytosol	67.4	68.52
Os06t0651600-01	Rice	cytosol	67.4	66.85
Zm00001d036710_P001	Maize	extracellular	66.03	66.03
EER90135	Sorghum	cytosol	65.75	65.57
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	68.22	65.53
TraesCS6D01G137200.1	Wheat	golgi	68.49	63.78
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	68.77	63.38
KRH61653	Soybean	cytosol	23.56	63.24
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	68.49	63.13
HORVU7Hr1G113110.1	Barley	cytosol	68.77	63.07
TraesCS7A01G504800.1	Wheat	cytosol	68.49	62.81
Zm00001d015504_P004	Maize	extracellular	67.95	61.85
TraesCS7D01G492000.1	Wheat	nucleus	68.77	61.07
TraesCS7B01G411900.1	Wheat	cytosol	68.49	60.83
Zm00001d046828_P003	Maize	cytosol	66.03	59.95
Zm00001d046831_P002	Maize	cytosol	64.66	57.99
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	16.16	53.64
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	23.01	52.83
GSMUA_Achr6P03990_001	Banana	plastid	64.66	52.1
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	16.44	50.0
CDY33277	Canola	nucleus	26.85	27.45
CDY16304	Canola	nucleus	26.3	27.04
CDY17190	Canola	cytosol	27.67	26.93
CDX78007	Canola	nucleus	26.03	26.32
CDY20937	Canola	cytosol	26.85	26.27
CDX73719	Canola	nucleus	25.75	26.04
CDX93640	Canola	cytosol	26.58	25.87
CDY27953	Canola	cytosol	26.85	25.65
CDY37699	Canola	cytosol	27.12	25.65
CDY11515	Canola	mitochondrion	26.58	25.53
CDY53789	Canola	cytosol	26.58	25.19
CDX76745	Canola	nucleus	26.3	24.49
CDY26191	Canola	cytosol	23.84	23.97
CDY11411	Canola	cytosol	24.38	23.8
CDX76624	Canola	cytosol	24.38	23.73
CDY37787	Canola	cytosol	23.84	23.71
CDX93981	Canola	cytosol	23.29	22.61
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.15	21.72
CDX95863	Canola	golgi, mitochondrion	24.93	21.72
CDY19191	Canola	cytosol, nucleus, peroxisome	23.01	21.37
CDX92122	Canola	mitochondrion	15.62	16.86
CDY66303	Canola	plastid	25.21	14.58
CDY35434	Canola	cytosol, plastid	25.75	14.31
CDY22485	Canola	cytosol	25.48	14.16

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.9	GO:A0A078JE35	UniProt:A0A078JE35	EnsemblPlants:CDY64719
ProteinID:CDY64719	ProteinID:CDY64719.1	ProteinID:CDY64720.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00042610001
InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF385	SMART:SM00331
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EF40B5	SEG:seg	:	:

Description

BnaC04g37520DBnaC04g37510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JE35]

Coordinates

chrLK034531:-:12549..14753

Molecular Weight (calculated)

40189.0 Da

IEP (calculated)

4.439

GRAVY (calculated)

-0.544

Length

365 amino acids

Sequence
(BLAST)

001: MGTYLSSPKT DKLSEEGEND TLRYGLSSMQ GWRATMEDAH AAILDVDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVLSNQ AYGAGDIETS LQRAFFRMDD
101: MMQGQRGWRE LAALGDKMNK FSGMIEGFIW SPRSGGDVSN QPDNWPLEDG PHSDFTGPNC GCTACVALIK DKKLFVANAG DSRCVISRKG QAYDLSKDHK
201: PDLEAEKERI LNAGGFIHAG RINGSLNLTR AIGDMEFKQN KFLSSDKQMV TANPDINTID LCDDDDFLVV ACDGIWDCMT SQQLVDFIHE QLKSETKLST
301: VCEKIVDRCL APDTASGEGC DNMTIILVQF KKPNSSETKV EEEDEVKPEG PEPSQEAQDE PSSSS

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.