CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76624	Canola	cytosol	71.39	69.87
CDY11411	Canola	cytosol	70.84	69.52
CDX93981	Canola	cytosol	71.12	69.41
GSMUA_AchrUn_...	Banana	cytosol	49.59	61.69
GSMUA_Achr10P...	Banana	cytosol	61.31	56.25
GSMUA_Achr8P22250_001	Banana	cytosol	56.4	56.1
Os05t0134200-01	Rice	cytosol	58.31	55.01
GSMUA_Achr3P08410_001	Banana	cytosol	60.76	54.66
Os01t0295700-01	Rice	cytosol	56.13	54.21
TraesCS5D01G089900.1	Wheat	cytosol	56.13	53.93
HORVU1Hr1G016640.2	Barley	cytosol	56.13	53.93
TraesCS1D01G079600.1	Wheat	cytosol	56.13	53.93
TraesCS1A01G077500.1	Wheat	cytosol	56.4	53.91
TraesCS5A01G076600.1	Wheat	cytosol	56.13	53.65
Zm00001d008171_P001	Maize	cytosol	57.77	53.54
TraesCS5B01G082500.1	Wheat	cytosol	55.86	53.52
EES17660	Sorghum	cytosol, peroxisome, plastid	58.31	53.37
TraesCS1B01G095600.1	Wheat	cytosol	55.59	53.12
EES02832	Sorghum	cytosol	58.04	53.12
HORVU5Hr1G020300.3	Barley	plastid	55.04	52.2
Zm00001d024732_P001	Maize	cytosol	56.95	51.6
CDX93640	Canola	cytosol	49.59	48.53
CDY20937	Canola	cytosol	49.32	48.53
CDY17190	Canola	cytosol	46.05	45.07
CDY27953	Canola	cytosol	46.59	44.76
CDY16304	Canola	nucleus	42.51	43.94
CDY53789	Canola	cytosol	46.05	43.9
CDY33277	Canola	nucleus	42.23	43.42
CDY37699	Canola	cytosol	45.5	43.26
CDX73719	Canola	nucleus	42.51	43.21
CDX78007	Canola	nucleus	42.51	43.21
CDX95863	Canola	golgi, mitochondrion	48.77	42.72
CDY66303	Canola	plastid	67.3	39.14
CDY11515	Canola	mitochondrion	40.33	38.95
CDX76745	Canola	nucleus	40.87	38.27
CDX92122	Canola	mitochondrion	34.88	37.87
CDX72331	Canola	cytosol	23.43	24.43
CDY13457	Canola	cytosol	23.43	24.43
CDX76775	Canola	nucleus	23.71	24.37
CDY53471	Canola	nucleus	23.71	23.9
CDY64720	Canola	nucleus	23.71	23.84
CDY64719	Canola	nucleus	23.71	23.84
CDY26191	Canola	cytosol	23.16	23.42
CDY34740	Canola	nucleus	23.71	21.97
CDY19191	Canola	cytosol, nucleus, peroxisome	23.16	21.63
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	11.44	19.0
CDY22485	Canola	cytosol	28.61	15.98
CDY35434	Canola	cytosol, plastid	27.79	15.53

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:A0A078HIU7	UniProt:A0A078HIU7
EnsemblPlants:CDY37787	ProteinID:CDY37787	ProteinID:CDY37787.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00064722001
InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF519	SMART:SM00331
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EEAFBF	SEG:seg	:	:

Description

BnaC04g00380DBnaC04g00380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HIU7]

Coordinates

chrLK032408:-:174817..176626

Molecular Weight (calculated)

39920.2 Da

IEP (calculated)

4.394

GRAVY (calculated)

-0.078

Length

367 amino acids

Sequence
(BLAST)

001: MVAEAEVTFQ QSLPAVLDIQ LLRASAGVTD IDGVSLSAVK SPVSLSGLRC SESDDDDDCS SSVSLDVPVI RSGSYADIGP RRSMEDEHIC IDDLSSRVAS
101: LHDLPKPSAF YAVFDGHGGP EAAAYVRKNA IKLFFEDEKF PQTSESSLRN AFLQADLALS EDRSINPSSG TTALTALVFG RHLMVANAGD CRAVLCRNGE
201: AIDMSQDHRP IYLPERSRVE SCGGFVDDGY LNGILSVTRA LGDWDMKLPR GSRSPLIAEP EIKQIRLTEE DEFLIMGCDG IWDVLTSQEA VSIVRRGLRR
301: HDDPMRSARE LALEALRLNT FDNLTVVVVC FLPVDNVAVA ADPTVEKQMC CSLTADAFQS LRAFLDG

Best Arabidopsis Sequence Match ( AT3G62260.1 )
(BLAST)

001: MVAEAEVVFQ QSLPAVLEIE LFDGVSSAVK SPVSSPKLGF TQSTASVSGS LTTSPVADIF PEGDCDPSVL DYIPTIRSGS FADIGPKRNM EDEHIRIDDL
101: SSQVGSLFEL PKPSAFYAVF DGHGGPEAAA YVRENAIRFF FEDEQFPQTS EVSSVYVEEV ETSLRNAFLQ ADLALAEDCS ISDSCGTTAL TALICGRLLM
201: VANAGDCRAV LCRKGRAIDM SEDHKPINLL ERRRVEESGG FITNDGYLNE VLAVTRALGD WDLKLPHGSQ SPLISEPEIK QITLTEDDEF LVIGCDGIWD
301: VLTSQEAVSI VRRGLNRHND PTRCARELVM EALGRNSFDN LTAVVVCFMT MDRGDKPVVP LEKRRCFSLS PEAFCSLRNL LDG

Arabidopsis Description

Probable protein phosphatase 2C 49 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.