CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 2
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92122	Canola	mitochondrion	75.89	94.08
AT3G17250.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	80.43	79.86
CDY20937	Canola	cytosol	57.76	64.88
CDX93640	Canola	cytosol	57.52	64.27
GSMUA_AchrUn_...	Banana	cytosol	37.95	53.9
CDX93981	Canola	cytosol	45.35	50.53
CDY11411	Canola	cytosol	44.87	50.27
TraesCS5B01G082500.1	Wheat	cytosol	45.58	49.87
CDX76624	Canola	cytosol	44.63	49.87
TraesCS5D01G089900.1	Wheat	cytosol	45.35	49.74
KRH02420	Soybean	cytosol	45.11	49.74
KRH50630	Soybean	cytosol	45.35	49.22
TraesCS5A01G076600.1	Wheat	cytosol	45.11	49.22
GSMUA_Achr8P22250_001	Banana	cytosol	43.2	49.05
KRH36917	Soybean	cytosol	47.26	48.89
CDY37787	Canola	cytosol	42.72	48.77
GSMUA_Achr10P...	Banana	cytosol	45.82	48.0
Os01t0295700-01	Rice	cytosol	43.44	47.89
HORVU5Hr1G020300.3	Barley	plastid	43.91	47.55
HORVU1Hr1G016640.2	Barley	cytosol	42.96	47.12
GSMUA_Achr3P08410_001	Banana	cytosol	45.82	47.06
TraesCS1D01G079600.1	Wheat	cytosol	42.72	46.86
Os05t0134200-01	Rice	cytosol	43.44	46.79
Zm00001d008171_P001	Maize	cytosol	44.15	46.72
TraesCS1A01G077500.1	Wheat	cytosol	42.72	46.61
TraesCS1B01G095600.1	Wheat	cytosol	42.72	46.61
VIT_05s0020g00390.t01	Wine grape	plastid	42.96	46.15
EES02832	Sorghum	cytosol	44.15	46.13
EES17660	Sorghum	cytosol, peroxisome, plastid	43.2	45.14
PGSC0003DMT400069839	Potato	cytosol	42.72	44.75
Zm00001d024732_P001	Maize	cytosol	42.0	43.46
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	42.48	43.31
CDY53789	Canola	cytosol	35.08	38.18
CDY17190	Canola	cytosol	33.65	37.6
CDY16304	Canola	nucleus	31.74	37.46
CDY11515	Canola	mitochondrion	33.89	37.37
CDY37699	Canola	cytosol	34.37	37.31
CDX73719	Canola	nucleus	31.74	36.84
CDX76745	Canola	nucleus	34.37	36.73
CDY33277	Canola	nucleus	31.26	36.69
CDY27953	Canola	cytosol	33.41	36.65
CDX78007	Canola	nucleus	31.5	36.57
CDY66303	Canola	plastid	43.44	28.84
CDY53471	Canola	nucleus	22.2	25.55
CDY64720	Canola	nucleus	21.72	24.93
CDY64719	Canola	nucleus	21.72	24.93
CDX76775	Canola	nucleus	21.24	24.93
CDX72331	Canola	cytosol	19.81	23.58
CDY13457	Canola	cytosol	19.81	23.58
CDY26191	Canola	cytosol	19.09	22.04
CDY34740	Canola	nucleus	20.76	21.97
CDY19191	Canola	cytosol, nucleus, peroxisome	19.09	20.36
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	10.26	19.46
CDY22485	Canola	cytosol	23.15	14.76
CDY35434	Canola	cytosol, plastid	22.67	14.46

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:A0A078E8Y7	EnsemblPlants:CDX95863
ProteinID:CDX95863	ProteinID:CDX95863.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	EnsemblPlantsGene:GSBRNA2T00101824001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF165	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	SignalP:SignalP-noTM
UniParc:UPI0004EC3C7D	SEG:seg	:	:	:	:

Description

BnaC05g36140D

Coordinates

chrLK031891:+:788025..789687

Molecular Weight (calculated)

47106.2 Da

IEP (calculated)

5.143

GRAVY (calculated)

-0.140

Length

419 amino acids

Sequence
(BLAST)

001: MRTSRASSVT KKWLLFSQLC LLKDLVIRCV RQFIRRAKAM LLSQNVVVEA AEISVVVDVK SSQQDLNSFQ IAQVRIRDSV CIEIPVPEET PLLGSVKTCS
101: VAEEDVTEFV PKISSGSYAD KGSREYMEDE HICIDDLSSH LASSFFRFPV PVAFYGVFDG HGGSEASQYI KENATRLFFE DDVFRESHFV LNNFFLQEVE
201: RSHREAYRLA DLAMEDESIV SGSCGTTALT ALVIGRHLMV ANVGDCRAVL CRKGKAVDMS FDHKSTFEAE RRRVEELGGY FEEEYIYGEL AVTRALGDWS
301: LKRYSSLGGS LSPLISDPEI KQMVLTEEDE FLIMGCDGVW DVMTSQYAVT FARQGLRRHG DPRRCAMELG REAFRLDSAD NVTVLVICFT SSSTTPQRRK
401: IQFCVSDEAR AKLQTMLQG

Best Arabidopsis Sequence Match ( AT3G17250.1 )
(BLAST)

001: MRTSKASVTQ TWLLYTQLCL WKDLIIRYVR QIIRRAKSML FSQNMVADSA EISVIDVKSH LSVAKDPSNF QIAEIRIHDS ICIDIPSSEE TPLLESIKSC
101: SATTIEEHVT EFVPNISSGS YADKGDYREY MEDEHICIDD LSDHLGSSFY RFPVPMAFYG VFDGHGGSDA SQYIKENAMS LFFEDAVFRQ SPSVVDSLFL
201: KELETSHREA YRLADLAMED ERIVSSSCGT TALTALVIGR HLMVANVGDC RAVLCRKGKA VDMSFDHKST FEPERRRVED LGGYFEGEYL YGDLAVTRAL
301: GDWSIKRFSP LGESLSPLIS DPDIQQMILT EEDEFLIMGC DGVWDVMTSQ YAVTFVRQGL RRHGDPRRCA MELGREALRL DSSDNVTVVV ICFSSSPAPQ
401: RRRIRFCVSD EARARLQTML EG

Arabidopsis Description

Probable protein phosphatase 2C 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUU7]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.