CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11411	Canola	cytosol	96.8	97.06
CDX93981	Canola	cytosol	89.6	89.36
AT3G62260.2	Thale cress	cytosol	81.07	79.17
CDY37787	Canola	cytosol	69.87	71.39
GSMUA_AchrUn_...	Banana	cytosol	47.47	60.34
GSMUA_Achr8P22250_001	Banana	cytosol	55.47	56.37
GSMUA_Achr10P...	Banana	cytosol	60.0	56.25
Os01t0295700-01	Rice	cytosol	56.27	55.53
Os05t0134200-01	Rice	cytosol	57.33	55.27
TraesCS5D01G089900.1	Wheat	cytosol	55.73	54.71
HORVU1Hr1G016640.2	Barley	cytosol	55.73	54.71
EES17660	Sorghum	cytosol, peroxisome, plastid	58.4	54.61
TraesCS5B01G082500.1	Wheat	cytosol	55.73	54.57
TraesCS1D01G079600.1	Wheat	cytosol	55.47	54.45
TraesCS1A01G077500.1	Wheat	cytosol	55.73	54.43
TraesCS5A01G076600.1	Wheat	cytosol	55.73	54.43
TraesCS1B01G095600.1	Wheat	cytosol	55.47	54.17
EES02832	Sorghum	cytosol	57.87	54.11
GSMUA_Achr3P08410_001	Banana	cytosol	58.67	53.92
Zm00001d008171_P001	Maize	cytosol	56.8	53.79
Zm00001d024732_P001	Maize	cytosol	57.6	53.33
HORVU5Hr1G020300.3	Barley	plastid	53.6	51.94
CDY66303	Canola	plastid	85.07	50.55
CDX93640	Canola	cytosol	49.87	49.87
CDY20937	Canola	cytosol	49.07	49.33
CDY16304	Canola	nucleus	43.47	45.92
CDX73719	Canola	nucleus	44.0	45.71
CDY33277	Canola	nucleus	43.47	45.66
CDX78007	Canola	nucleus	43.73	45.43
CDX95863	Canola	golgi, mitochondrion	49.87	44.63
CDY17190	Canola	cytosol	44.53	44.53
CDY27953	Canola	cytosol	44.53	43.72
CDY53789	Canola	cytosol	44.27	43.12
CDY37699	Canola	cytosol	44.27	43.01
CDY11515	Canola	mitochondrion	41.33	40.79
CDX76745	Canola	nucleus	42.13	40.31
CDX92122	Canola	mitochondrion	36.27	40.24
CDY13457	Canola	cytosol	23.2	24.72
CDX72331	Canola	cytosol	23.2	24.72
CDX76775	Canola	nucleus	23.47	24.65
CDY53471	Canola	nucleus	23.73	24.45
CDY64720	Canola	nucleus	23.73	24.38
CDY64719	Canola	nucleus	23.73	24.38
CDY26191	Canola	cytosol	22.93	23.69
CDY34740	Canola	nucleus	23.2	21.97
CDY19191	Canola	cytosol, nucleus, peroxisome	22.93	21.88
CDY26194	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	11.2	19.0
CDY22485	Canola	cytosol	26.4	15.07
CDY35434	Canola	cytosol, plastid	25.33	14.46

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:A0A078CKS4	EnsemblPlants:CDX76624
ProteinID:CDX76624	ProteinID:CDX76624.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	EnsemblPlantsGene:GSBRNA2T00127088001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF519	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0004EAF7EF
SEG:seg	:	:	:	:	:

Description

BnaC08g32100D

Coordinates

chrLK031808:-:231515..233641

Molecular Weight (calculated)

40634.2 Da

IEP (calculated)

4.556

GRAVY (calculated)

-0.096

Length

375 amino acids

Sequence
(BLAST)

001: MVAEAEVVFQ QSLPVVLDID GVTSAVVSPL SSPKLGIRRS AASVSGGLST SPVQEDDCDS TIPVYIPTIR SGSYADIGPK RSMEDEHICV DDLSSQLGCL
101: FQLPKPSAFY AVFDGHGGSE AATYVKQNAI RLLFEDDNFP QTSEVNSVYV EQVKSSLRNA FLQADLALAE DCSISSSSGT TALAALISGR LLMVANAGDC
201: RAVLCRKGKA IEMSHDHRPI NLPERRRVEE SGGVIEDGYL NGELSVTRAL GDWDMKRPHG SNSPLISEPE IKQITLTEED EFLVIGCDGI WDVLTSQEAV
301: SVVKRGLNRH GDPTRCAREL VMEALRLNTF DNLTAVVVCF VTVDREGEAV VPLEKKRCCS LTPEAFRSLR NLLDG

Best Arabidopsis Sequence Match ( AT3G62260.2 )
(BLAST)

001: MVAEAEVVFQ QSLPAVLEIE LFDGVSSAVK SPVSSPKLGF TQSTASVSGS LTTSPVQADI FPEGDCDPSV LDYIPTIRSG SFADIGPKRN MEDEHIRIDD
101: LSSQVGSLFE LPKPSAFYAV FDGHGGPEAA AYVRENAIRF FFEDEQFPQT SEVSSVYVEE VETSLRNAFL QADLALAEDC SISDSCGTTA LTALICGRLL
201: MVANAGDCRA VLCRKGRAID MSEDHKPINL LERRRVEESG GFITNDGYLN EVLAVTRALG DWDLKLPHGS QSPLISEPEI KQITLTEDDE FLVIGCDGIW
301: DVLTSQEAVS IVRRGLNRHN DPTRCARELV MEALGRNSFD NLTAVVVCFM TMDRGDKPVV PLEKRRCFSL SPEAFCSLRN LLDG

Arabidopsis Description

Probable protein phosphatase 2C 49 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.