CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26191	Canola	cytosol	76.47	46.56
CDY19191	Canola	cytosol, nucleus, peroxisome	78.28	44.02
KRH48594	Soybean	cytosol, peroxisome, plastid	47.51	43.21
EER98699	Sorghum	cytosol, peroxisome, plastid	55.2	33.89
TraesCS5D01G185900.1	Wheat	nucleus	54.75	33.61
TraesCS5A01G181600.1	Wheat	nucleus	54.75	33.61
HORVU5Hr1G055300.9	Barley	nucleus	54.75	33.61
Zm00001d020053_P002	Maize	cytosol, nucleus, peroxisome	54.3	33.33
TraesCS5B01G179300.1	Wheat	cytosol, nucleus, peroxisome	54.3	33.33
Os09t0314400-01	Rice	mitochondrion	53.85	28.47
CDX73719	Canola	nucleus	23.53	14.4
CDX78007	Canola	nucleus	23.53	14.4
CDY33277	Canola	nucleus	23.08	14.29
CDY16304	Canola	nucleus	22.62	14.08
CDX76775	Canola	nucleus	22.17	13.73
CDY13457	Canola	cytosol	21.27	13.35
CDX72331	Canola	cytosol	21.27	13.35
CDY53471	Canola	nucleus	21.72	13.19
CDY64719	Canola	nucleus	21.72	13.15
CDY64720	Canola	nucleus	21.72	13.15
CDY20937	Canola	cytosol	21.72	12.87
CDX92122	Canola	mitochondrion	19.46	12.72
CDY37699	Canola	cytosol	22.17	12.69
CDY27953	Canola	cytosol	21.72	12.57
CDY17190	Canola	cytosol	21.27	12.53
CDY53789	Canola	cytosol	21.72	12.47
CDX93640	Canola	cytosol	20.81	12.27
CDY34740	Canola	nucleus	21.72	12.12
CDY37787	Canola	cytosol	19.0	11.44
CDY11411	Canola	cytosol	19.0	11.23
CDX76624	Canola	cytosol	19.0	11.2
CDX93981	Canola	cytosol	19.0	11.17
CDY11515	Canola	mitochondrion	19.0	11.05
CDX76745	Canola	nucleus	19.0	10.71
CDX95863	Canola	golgi, mitochondrion	19.46	10.26
CDY35434	Canola	cytosol, plastid	22.62	7.61
CDY22485	Canola	cytosol	22.62	7.61
CDY66303	Canola	plastid	19.0	6.66

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:A0A078GLS5	UniProt:A0A078GLS5
EnsemblPlants:CDY26194	ProteinID:CDY26194	ProteinID:CDY26194.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00034857001	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF348	SUPFAM:SSF81606
SignalP:SignalP-noTM	UniParc:UPI0004EE9C73	:	:	:	:

Description

BnaA06g12230DBnaA06g12230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLS5]

Coordinates

chrLK032186:-:208787..210342

Molecular Weight (calculated)

24259.8 Da

IEP (calculated)

7.540

GRAVY (calculated)

-0.114

Length

221 amino acids

Sequence
(BLAST)

001: MVKFAVVLID FYLSRGFDLS AGEEVRGSSS CISEEKKGFV FEADFAKDKG ARHSMEDVSV VLPDASLDFP GILRCGHFAI YDWHSGRLAA EFAKHLHLNV
101: LSAGLPRELL DVKVAKKAIL DGFRKTDDVS GRGWQDGATA VCVWIVDQKV FIANIGDAKT VFARSSTTNE SGNHTEACTP LKAIVLTREH KAIYPQERSR
201: IQKTSDIYSK SSTTCSVSNL V

Best Arabidopsis Sequence Match ( AT1G18030.2 )
(BLAST)

001: MLEKESDLTA MEKPNNKHAA DSFSSEDLVS PVKKAKKSEE VSGGGEAVAA VGNREAEEDK PSFVSEEKKE FLVEADVAED KGARHTMEDV WVVLPDASLD
101: FPGTLRCAHF AIYDGHGGRL AAEFAKKHLH LNVLSAGLPR ELLDVKVAKK AILEGFRKTD ELLLQKSVSG GWQDGATAVC VWILDQKVFV ANIGDAKAVL
201: ARSSTTNELG NHTEAGNPLK AIVLTREHKA IYPQERSRIQ KSGGVISSNG RLQGRLEVSR AFGDRHFKKF GVSATPDIHA FELTERENFM ILGCDGLWEV
301: SVWTK

Arabidopsis Description

Probable protein phosphatase 2C 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMT1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.