Factsheet for TraesCS6A01G147900.4

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:

mitochondrion 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	98.48	98.48
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	94.19	98.16
TraesCS6D01G137200.1	Wheat	golgi	95.45	96.43
Os02t0180000-01	Rice	cytosol, plasma membrane	78.79	86.19
EES04637	Sorghum	cytosol	76.77	84.68
GSMUA_Achr4P12780_001	Banana	cytosol	71.21	79.21
KRH61652	Soybean	cytosol	37.88	77.72
GSMUA_Achr10P...	Banana	cytosol	65.15	77.01
KRH52312	Soybean	cytosol	66.67	76.52
Zm00001d015504_P004	Maize	extracellular	77.27	76.31
CDX72331	Canola	cytosol	67.68	76.14
CDY13457	Canola	cytosol	67.42	75.85
AT4G31860.1	Thale cress	cytosol	66.41	73.67
TraesCS7A01G504800.1	Wheat	cytosol	73.99	73.62
KRH15637	Soybean	cytosol	62.12	72.57
Solyc08g006060.2.1	Tomato	cytosol	61.62	71.76
AT2G25070.2	Thale cress	nucleus	64.14	71.55
VIT_04s0008g06720.t01	Wine grape	cytosol, extracellular, mitochondrion	70.71	71.25
CDX76775	Canola	nucleus	64.14	71.15
KRH44580	Soybean	endoplasmic reticulum	65.91	70.92
Bra023979.1-P	Field mustard	cytosol	66.92	70.67
KRH47317	Soybean	cytosol	65.15	70.11
KRH05380	Soybean	golgi	62.12	69.1
CDY64719	Canola	nucleus	63.13	68.49
CDY64720	Canola	nucleus	63.13	68.49
Bra007820.1-P	Field mustard	nucleus	64.14	68.28
Bra032043.1-P	Field mustard	nucleus	62.63	68.13
CDY53471	Canola	nucleus	62.37	67.86
Solyc08g074230.1.1	Tomato	cytosol, nucleus, peroxisome	44.44	64.94
KRH61653	Soybean	cytosol	22.22	64.71
CDY34740	Canola	nucleus	63.64	63.64
VIT_09s0018g01140.t01	Wine grape	nucleus	57.07	63.13
TraesCS5A01G359900.1	Wheat	cytosol	58.59	61.05
Solyc12g042570.1.1	Tomato	nucleus	50.25	59.58
GSMUA_Achr6P03990_001	Banana	plastid	65.4	57.17
TraesCS7A01G532000.1	Wheat	mitochondrion	26.77	41.25
TraesCS4A01G120800.1	Wheat	cytosol	36.62	38.26
TraesCS2A01G354400.1	Wheat	cytosol	36.11	37.43
TraesCS6A01G037000.1	Wheat	cytosol	29.29	36.25
TraesCS7A01G371100.1	Wheat	plastid	23.48	25.83
TraesCS1A01G202300.1	Wheat	plastid	23.99	25.68
TraesCS6A01G363900.1	Wheat	cytosol	21.97	24.72
TraesCS7A01G143200.2	Wheat	cytosol	21.46	24.08
TraesCS5A01G076600.1	Wheat	cytosol	22.98	23.7
TraesCS1A01G077500.1	Wheat	cytosol	22.47	23.18
TraesCS5A01G181600.1	Wheat	nucleus	20.96	23.06
TraesCS3A01G200800.1	Wheat	cytosol	22.98	13.85

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.9	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF385	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS6A01G147900	EnsemblPlants:TraesCS6A01G147900.4
TIGR:cd00143	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:128443384..128448118

Molecular Weight (calculated)

43694.9 Da

IEP (calculated)

5.463

GRAVY (calculated)

-0.372

Length

396 amino acids

Sequence
(BLAST)

001: MHWNVVNKVQ SYLNCGIHST SQISFLAKMG VYLSTPKTDK LSEDGENDKL KFGLSSMQGW RASMEDAHSA LLDLDNETAF FGVFDGHGGR VVAKFCAKYL
101: HSQVLKSEAY SSGDLGTAVH KAFFRMDEMM RGQRGWRELS ALGDKMNKFS GMIEGLIWSP RGSDSKNAED DWTLEEGPHS DFDGPTCGST ACVALVRNNQ
201: LVVANAGDSR CVISRAGQAY NLSRDHKPEL VAERERILKA GGFIRMGRIN GSLNLARAIG DMEFKQNKFL PPEKQIVTSN PDINVVELCN EDDFLVLACD
301: GIWDCMSSQQ LVDFIHEHIN TSTEGVLVMF NNDTKMQESS LSAVCERVLD RCLAPSTMGG DGCDNMTMIL VQFKKPVSDK KKADVGEQSA KGKEES

Best Arabidopsis Sequence Match ( AT4G31860.3 )
(BLAST)

001: MGIYLSTPKT DKFSEDGENH KLRYGLSSMQ GWRASMEDAH AAILDLDDNT SFLGVYDGHG GKVVSKFCAK YLHQQVLSDE AYAAGDVGTS LQKAFFRMDE
101: MMQGQRGWRE LAVLGDKINK FSGMIEGLIW SPRSGDSANK PDAWAFEEGP HSDFAGPNSG STACVAVVRD KQLFVANAGD SRCVISRKNQ AYNLSRDHKP
201: DLEAEKERIL KAGGFIHAGR VNGSLNLSRA IGDMEFKQNK FLPSEKQIVT ASPDVNTVEL CDDDDFLVLA CDGIWDCMTS QQLVDFIHEQ LNSVS

Arabidopsis Description

Probable protein phosphatase 2C 60 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.