Factsheet for TraesCS6A01G037000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G051200.1	Wheat	cytosol	87.19	85.85
TraesCS7A01G532000.1	Wheat	mitochondrion	31.25	38.91
Os02t0606900-01	Rice	cytosol	39.38	37.06
TraesCS4A01G120800.1	Wheat	cytosol	43.75	36.94
KXG30563	Sorghum	mitochondrion	38.44	30.0
TraesCS2A01G354400.1	Wheat	cytosol	35.31	29.58
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	36.25	29.29
TraesCS5A01G359900.1	Wheat	cytosol	34.38	28.95
TraesCS7A01G504800.1	Wheat	cytosol	35.62	28.64
Os02t0600033-00	Rice	cytoskeleton, cytosol, nucleus	39.69	27.14
Os02t0599700-01	Rice	nucleus, peroxisome, plastid	18.75	27.03
Os02t0598500-00	Rice	cytosol	40.0	24.57
Os02t0599150-01	Rice	cytosol	40.0	24.57
TraesCS7A01G143200.2	Wheat	cytosol	25.94	23.51
TraesCS6A01G363900.1	Wheat	cytosol	25.0	22.73
Os02t0607500-00	Rice	vacuole	38.75	21.34
TraesCS1A01G077500.1	Wheat	cytosol	24.69	20.57
TraesCS1A01G202300.1	Wheat	plastid	23.75	20.54
TraesCS7A01G371100.1	Wheat	plastid	22.5	20.0
TraesCS5A01G076600.1	Wheat	cytosol	23.75	19.79
TraesCS5A01G181600.1	Wheat	nucleus	20.94	18.61
Os02t0599151-00	Rice	vacuole	39.38	17.14
TraesCS3A01G200800.1	Wheat	cytosol	20.62	10.05
Os02t0599200-01	Rice	cytosol, peroxisome	10.94	7.59

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF323	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS6A01G037000
EnsemblPlants:TraesCS6A01G037000.1	TIGR:cd00143	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6A:+:18080690..18083593

Molecular Weight (calculated)

34701.2 Da

IEP (calculated)

6.300

GRAVY (calculated)

-0.231

Length

320 amino acids

Sequence
(BLAST)

001: MGQGPSLSHE NSSIEYAAGS RKGSNSKVEN VHCTILDLDG SSSTSFFGVY DGHGGADVAL YCANNFHRVL VNDGDYKDNL DVALKRAFTR MDEQLDQNDD
101: WRTLANPPGV GVKLLCFPST APRVQGTPYM EGSTACVVLI RGNQIILGNV GDSCCVLSRD DSQQATELST KHTPENQDER NRIKTAGGQL LNVGGADLVN
201: GILPLTRAIG TFRFKPPSAG HIVTCIPDMH IADITHDTEY LLIANRAFWD TTPISSEMAV KYLRQYSGSY SVASMCDKLL NLCRNPMDNL TLILVYFKPS
301: ARLPRPAPPA PTNLPVPVVG

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.