Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS4D01G185200.1 | Wheat | mitochondrion | 95.78 | 90.3 |
TraesCS4B01G184100.1 | Wheat | mitochondrion | 94.46 | 88.61 |
HORVU4Hr1G053970.1 | Barley | mitochondrion, nucleus, plastid | 84.7 | 75.0 |
TraesCS7A01G532000.1 | Wheat | mitochondrion | 35.36 | 52.14 |
Os02t0606900-01 | Rice | cytosol | 44.85 | 50.0 |
TraesCS6A01G037000.1 | Wheat | cytosol | 36.94 | 43.75 |
TraesCS2A01G354400.1 | Wheat | cytosol | 40.11 | 39.79 |
TraesCS6A01G147900.4 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 38.26 | 36.62 |
KXG30563 | Sorghum | mitochondrion | 39.05 | 36.1 |
TraesCS7A01G504800.1 | Wheat | cytosol | 37.73 | 35.93 |
TraesCS5A01G359900.1 | Wheat | cytosol | 35.88 | 35.79 |
Os02t0600033-00 | Rice | cytoskeleton, cytosol, nucleus | 41.42 | 33.55 |
Os02t0598500-00 | Rice | cytosol | 43.8 | 31.86 |
Os02t0599150-01 | Rice | cytosol | 43.8 | 31.86 |
Os02t0599700-01 | Rice | nucleus, peroxisome, plastid | 17.15 | 29.28 |
Os02t0607500-00 | Rice | vacuole | 44.85 | 29.26 |
TraesCS6A01G363900.1 | Wheat | cytosol | 24.8 | 26.7 |
TraesCS7A01G143200.2 | Wheat | cytosol | 23.75 | 25.5 |
TraesCS7A01G371100.1 | Wheat | plastid | 24.01 | 25.28 |
TraesCS1A01G202300.1 | Wheat | plastid | 23.22 | 23.78 |
TraesCS5A01G076600.1 | Wheat | cytosol | 22.96 | 22.66 |
Os02t0599151-00 | Rice | vacuole | 43.54 | 22.45 |
TraesCS1A01G077500.1 | Wheat | cytosol | 22.69 | 22.4 |
TraesCS5A01G181600.1 | Wheat | nucleus | 20.32 | 21.39 |
Os02t0599200-01 | Rice | cytosol, peroxisome | 16.09 | 13.23 |
TraesCS3A01G200800.1 | Wheat | cytosol | 21.11 | 12.18 |
Protein Annotations
KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | Gene3D:3.60.40.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | InterPro:IPR001932 | InterPro:IPR036457 |
PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 |
PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF323 | SMART:SM00332 | SUPFAM:SSF81606 | EnsemblPlantsGene:TraesCS4A01G120800 |
EnsemblPlants:TraesCS4A01G120800.1 | TIGR:cd00143 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:149026031..149032337
Molecular Weight (calculated)
41882.9 Da
IEP (calculated)
4.762
GRAVY (calculated)
-0.546
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDATTKCSA GEENDRIKYA TSSMKGFRDE MEDALTAVLD LDGYSSTSFF GVYDGHGGAD VALYCSRQFH IELTREPDYG NNLRTALEHV YFRIDKKLKR
101: SDEWKREPAH PPGSRTLKNL LRAALCEERY VPPQQEGTTA CVALIRGNQI IVGNIGDSRC VLSRNGQAND LSTDHKPDLQ QERERIERAG GQVTRDENPQ
201: RDFTGRLVSV DLGIHRIGGK LAISRAIGDF QFKQNKTLSP AEQIVTSSPD IHTVDITDDT EFLIIASDGI WDVKSSQEAV DFVRQRLQSG EIDLRAICER
301: LLDSCLGRRR MSDNMSVIVV QFKAGARANP TATAEARADE IEVSIEVGQP SNGNEDDDGS VNGCIGCFGR LDMFEAGQD
101: SDEWKREPAH PPGSRTLKNL LRAALCEERY VPPQQEGTTA CVALIRGNQI IVGNIGDSRC VLSRNGQAND LSTDHKPDLQ QERERIERAG GQVTRDENPQ
201: RDFTGRLVSV DLGIHRIGGK LAISRAIGDF QFKQNKTLSP AEQIVTSSPD IHTVDITDDT EFLIIASDGI WDVKSSQEAV DFVRQRLQSG EIDLRAICER
301: LLDSCLGRRR MSDNMSVIVV QFKAGARANP TATAEARADE IEVSIEVGQP SNGNEDDDGS VNGCIGCFGR LDMFEAGQD
001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS
Arabidopsis Description
PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.