Factsheet for TraesCS7A01G371100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G256300.1	Wheat	mitochondrion, plastid	96.94	96.41
TraesCS7D01G351600.1	Wheat	cytosol, plastid	96.94	95.36
HORVU7Hr1G085010.2	Barley	plastid	96.11	94.79
Os06t0597200-01	Rice	cytosol	85.28	83.65
EER88596	Sorghum	cytosol, plastid	81.94	81.94
Zm00001d046450_P001	Maize	cytosol, plastid	80.56	80.56
GSMUA_Achr7P08470_001	Banana	cytosol	71.39	67.1
KRH61828	Soybean	cytosol	68.33	66.49
KRH52505	Soybean	cytosol	68.06	66.22
VIT_04s0008g04780.t01	Wine grape	cytosol	69.72	66.05
Solyc06g065610.2.1	Tomato	plastid	68.06	65.33
GSMUA_Achr10P...	Banana	cytosol	69.17	64.84
PGSC0003DMT400067098	Potato	cytosol, plastid	67.22	64.53
AT2G25620.2	Thale cress	nucleus	65.0	59.69
Bra007784.1-P	Field mustard	nucleus	63.06	57.91
CDX76745	Canola	nucleus	63.06	57.91
CDY11515	Canola	mitochondrion	61.11	57.89
TraesCS6A01G363900.1	Wheat	cytosol	51.94	53.12
TraesCS7A01G143200.2	Wheat	cytosol	51.67	52.69
TraesCS1A01G202300.1	Wheat	plastid	48.89	47.57
TraesCS1A01G077500.1	Wheat	cytosol	43.33	40.62
TraesCS5A01G076600.1	Wheat	cytosol	41.94	39.32
TraesCS5A01G359900.1	Wheat	cytosol	28.33	26.84
TraesCS5A01G181600.1	Wheat	nucleus	24.17	24.17
TraesCS7A01G504800.1	Wheat	cytosol	26.67	24.12
TraesCS4A01G120800.1	Wheat	cytosol	25.28	24.01
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	25.83	23.48
TraesCS6A01G037000.1	Wheat	cytosol	20.0	22.5
TraesCS2A01G354400.1	Wheat	cytosol	23.61	22.25
TraesCS7A01G532000.1	Wheat	mitochondrion	15.28	21.4
TraesCS3A01G200800.1	Wheat	cytosol	27.22	14.92

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006470	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0050688	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF346	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS7A01G371100	EnsemblPlants:TraesCS7A01G371100.1	TIGR:cd00143
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:544892556..544896799

Molecular Weight (calculated)

38826.9 Da

IEP (calculated)

4.808

GRAVY (calculated)

-0.192

Length

360 amino acids

Sequence
(BLAST)

001: MEELRLGGGG GKPPIPSSAS ARKPVLSRHA SFARGPLSNT KSETERSFEN ADVEYIPIVR SGGWSDIGSR SAMEDVYICC DNFLRDFGPE NCEEGPSSFY
101: GVFDGHGGKH AADFVCSNLP RFIVEGDGFP GEIEKAVSSA FLQTDAAFAD ACSVNSSLAS GTTALAALII GRSLLVANAG DCRAVVCCRG KAIEMSRDHK
201: PSCNREKMRI EASGGYVYDG YLNGLLNVAR AIGDWHMEGM KACDGLGPLS AEPEVMMRNL TEEDEFLIIG CDGIWDVFRS QNAVDFARRR LQEHNDPIAC
301: CKELVDEAIK RKSGDNLSVV VVCFNSIAPP VLTAPRPRVQ RSISAEGLRE LQGFLDSLAD

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.