CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046450_P001	Maize	cytosol, plastid	93.06	93.06
Os06t0597200-01	Rice	cytosol	87.5	85.83
HORVU7Hr1G085010.2	Barley	plastid	83.89	82.74
TraesCS7B01G256300.1	Wheat	mitochondrion, plastid	82.78	82.32
TraesCS7D01G351600.1	Wheat	cytosol, plastid	83.33	81.97
TraesCS7A01G371100.1	Wheat	plastid	81.94	81.94
GSMUA_Achr7P08470_001	Banana	cytosol	73.06	68.67
GSMUA_Achr10P...	Banana	cytosol	71.94	67.45
VIT_04s0008g04780.t01	Wine grape	cytosol	71.11	67.37
KRH61828	Soybean	cytosol	68.33	66.49
KRH52505	Soybean	cytosol	67.78	65.95
Solyc06g065610.2.1	Tomato	plastid	68.61	65.87
PGSC0003DMT400067098	Potato	cytosol, plastid	67.78	65.07
AT2G25620.2	Thale cress	nucleus	65.56	60.2
CDY11515	Canola	mitochondrion	62.5	59.21
Bra007784.1-P	Field mustard	nucleus	63.61	58.42
CDX76745	Canola	nucleus	63.06	57.91
EER89322	Sorghum	cytosol	50.83	51.69
EES05962	Sorghum	cytosol	50.83	51.55
KXG39006	Sorghum	plastid	51.67	50.0
EES17660	Sorghum	cytosol, peroxisome, plastid	44.44	39.9
EES02832	Sorghum	cytosol	42.22	37.91
KXG32675	Sorghum	cytosol	5.83	33.33
KXG36172	Sorghum	cytosol	27.22	27.0
EER98699	Sorghum	cytosol, peroxisome, plastid	26.11	26.11
EES04637	Sorghum	cytosol	25.56	25.63
EER90135	Sorghum	cytosol	25.83	25.41
KXG26265	Sorghum	cytosol	19.72	20.64
OQU81890	Sorghum	plastid	25.0	20.36
KXG30563	Sorghum	mitochondrion	18.89	16.59
KXG32674	Sorghum	mitochondrion, nucleus, peroxisome	9.17	15.28

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	EntrezGene:8082239	UniProt:C5Z5J5
EnsemblPlants:EER88596	ProteinID:EER88596	ProteinID:EER88596.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006470	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0046872	GO:GO:0050688	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF346	SMART:SM00332	EnsemblPlantsGene:SORBI_3010G180700	SUPFAM:SSF81606	unigene:Sbi.21170
UniParc:UPI0001A8938A	RefSeq:XP_002437229.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:52008476..52012827

Molecular Weight (calculated)

39178.2 Da

IEP (calculated)

4.896

GRAVY (calculated)

-0.291

Length

360 amino acids

Sequence
(BLAST)

001: MEEHVPRGGG GGGRPPIPAA ARKPALARHS SFVRSPANNK KPENERTFES MDTEFIPVVR SAGWADIGSR HTMEDVFICS DNFMQDFGFE SSDEGPSAFY
101: GVFDGHGGKH AADFVCSNLP RFIVEDEGFP REIVKAVSSA FLQVDAAFAD ACSLNCSLAS GTTALAALVV GRSLLVANAG DCRAVLCRRG KAIEMSRDHK
201: PSCNREKMRI EALGGYVDDD YLNGQLNVAR AIGDWHMEGM KACDGLGPLS AEPEVMTTDL TEEDEFLIMG CDGIWDVFRS QNAVDFARRK LQEHNDPAAC
301: CKELVDEAIK RKSGDNLSVV VVCFNSRPPP VLTTPRPRVQ RSISAEGLRE LQSFLDSLAD

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.