Factsheet for PGSC0003DMT400067098

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g065610.2.1	Tomato	plastid	95.47	95.47
KRH61828	Soybean	cytosol	72.0	72.97
KRH52505	Soybean	cytosol	70.93	71.89
VIT_04s0008g04780.t01	Wine grape	cytosol	71.73	70.79
EER88596	Sorghum	cytosol, plastid	65.07	67.78
TraesCS7A01G371100.1	Wheat	plastid	64.53	67.22
TraesCS7B01G256300.1	Wheat	mitochondrion, plastid	64.8	67.13
Zm00001d046450_P001	Maize	cytosol, plastid	64.0	66.67
Os06t0597200-01	Rice	cytosol	65.07	66.48
HORVU7Hr1G085010.2	Barley	plastid	64.53	66.3
TraesCS7D01G351600.1	Wheat	cytosol, plastid	64.53	66.12
GSMUA_Achr7P08470_001	Banana	cytosol	66.93	65.54
GSMUA_Achr10P...	Banana	cytosol	64.8	63.28
AT2G25620.2	Thale cress	nucleus	66.13	63.27
CDY11515	Canola	mitochondrion	62.67	61.84
CDX76745	Canola	nucleus	64.53	61.73
Bra007784.1-P	Field mustard	nucleus	63.73	60.97
PGSC0003DMT400020228	Potato	cytosol	48.53	47.52
PGSC0003DMT400078867	Potato	nucleus	48.0	47.0
PGSC0003DMT400059610	Potato	cytosol	45.87	46.36
PGSC0003DMT400025874	Potato	cytosol	46.4	45.19
PGSC0003DMT400003812	Potato	cytosol, mitochondrion	43.73	42.71
PGSC0003DMT400018825	Potato	cytosol	39.2	41.76
PGSC0003DMT400013370	Potato	cytosol	39.2	41.76
PGSC0003DMT400041953	Potato	cytosol, peroxisome, plastid	19.2	34.95
PGSC0003DMT400069839	Potato	cytosol	37.07	34.75
PGSC0003DMT400014727	Potato	peroxisome	20.8	23.08

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102602181	MapMan:15.5.38	Gene3D:3.60.40.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006470
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	GO:GO:0050688	InterPro:IPR001932
InterPro:IPR036457	UniProt:M1CGP3	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400026085	PGSC:PGSC0003DMG400026085	EnsemblPlants:PGSC0003DMT400067098
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF346	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000295755E	RefSeq:XP_006353648.1
SEG:seg	:	:	:	:	:

Description

Protein phosphatase 2C [Source:PGSC_GENE;Acc:PGSC0003DMG400026085]

Coordinates

chr6:-:46214746..46219803

Molecular Weight (calculated)

40912.2 Da

IEP (calculated)

5.905

GRAVY (calculated)

-0.382

Length

375 amino acids

Sequence
(BLAST)

001: MEESKMMFDN CSRGNESSSN SKPPNPLAGD RRLVASATKK SLVRHPSLVR TKLSDVPPEP RTATGDHATE YLPILRSGAW ADIGSRSSME DVYVCTDNLM
101: SHHRTTSSTE GTHAFYGVFD GHGGKHAADF ACNHLPRFIA EDEDFPRQID RAISSAFLQT DTAFAEACHV DADLASGTTA LAALVIGSSL VVANAGDCRA
201: VLCRRGKAIE MSRDHKPGCF GEKERIEASG GYVYDGYLNG QLNVARALGD WHLEGLKSID GGPLSGEPEL MSTRLTEEDE FLIIGCDGIW DVFMSQNAVD
301: FARRRLQEHN NPVMCSKDLV DEALKRKSGD NLSVVVVCFQ KQPPSNLVVP RGRVHRSISA EGLKELQGFL DTLKD

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.