Factsheet for Solyc06g065610.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400067098	Potato	cytosol, plastid	95.47	95.47
KRH61828	Soybean	cytosol	71.73	72.7
KRH52505	Soybean	cytosol	70.4	71.35
VIT_04s0008g04780.t01	Wine grape	cytosol	71.2	70.26
EER88596	Sorghum	cytosol, plastid	65.87	68.61
TraesCS7A01G371100.1	Wheat	plastid	65.33	68.06
TraesCS7B01G256300.1	Wheat	mitochondrion, plastid	65.6	67.96
Zm00001d046450_P001	Maize	cytosol, plastid	64.8	67.5
Os06t0597200-01	Rice	cytosol	65.87	67.3
HORVU7Hr1G085010.2	Barley	plastid	65.33	67.12
TraesCS7D01G351600.1	Wheat	cytosol, plastid	65.33	66.94
GSMUA_Achr7P08470_001	Banana	cytosol	67.73	66.32
GSMUA_Achr10P...	Banana	cytosol	65.07	63.54
AT2G25620.2	Thale cress	nucleus	65.07	62.24
CDY11515	Canola	mitochondrion	61.6	60.79
CDX76745	Canola	nucleus	63.47	60.71
Bra007784.1-P	Field mustard	nucleus	62.67	59.95
Solyc12g010450.1.1	Tomato	cytosol, nucleus, peroxisome	43.2	51.27
Solyc07g007220.2.1	Tomato	nucleus	47.73	46.74
Solyc04g082600.2.1	Tomato	cytosol	45.6	44.42
Solyc02g082490.2.1	Tomato	cytosol	43.73	42.71
Solyc01g068000.2.1	Tomato	cytosol	40.0	42.61
Solyc06g009390.2.1	Tomato	cytosol	37.87	40.34
Solyc05g053290.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	37.33	34.06
Solyc12g042570.1.1	Tomato	nucleus	25.33	28.44
Solyc03g118890.2.1	Tomato	cytosol, nucleus, peroxisome	20.8	25.74
Solyc08g006060.2.1	Tomato	cytosol	22.93	25.29
Solyc08g074230.1.1	Tomato	cytosol, nucleus, peroxisome	14.67	20.3
Solyc01g056690.2.1	Tomato	cytosol	28.53	16.39

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006470	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	GO:GO:0050688	InterPro:IPR001932	InterPro:IPR036457
UniProt:K4C7J0	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF346	SMART:SM00332	SUPFAM:SSF81606
EnsemblPlantsGene:Solyc06g065610.2	EnsemblPlants:Solyc06g065610.2.1	UniParc:UPI000276577E	SEG:seg	:	:

Description

No Description!

Coordinates

chr6:+:40986594..40991543

Molecular Weight (calculated)

40808.1 Da

IEP (calculated)

5.770

GRAVY (calculated)

-0.342

Length

375 amino acids

Sequence
(BLAST)

001: MEESKLMFDN CSRGNESSSN SKPPNPLAGD RRLVASATKK ALVRHPSLVR TKLSDVPLEP RTATGDHAAE YLPILRSGAW ADIGSRSSME DVYVCADNLM
101: SHHRTAGSNE GTHAFYGVFD GHGGKHAADF ACNHLPRFIA EDEDFPRQID RAISSAFLQT DTAFAEACNL DADLASGTTA LAALVIGSSL VVANAGDCRA
201: VLCRRGKAIE MSRDHKPGCF GEKERIEASG GYVYDGYLNG QLNVARALGD WHLEGLKSID GGPLSGEPEV MSTRLTEEDE FLIIGCDGIW DVFMSQNAVD
301: FARRKLQEHN NPVMCCKDLV DEALKRKSGD NLSVVVVCFQ KQRPPDLVVP RGRVHRSISA EGLKELQGFL DSLKD

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.