Factsheet for GSMUA_Achr10P28320_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P08470_001	Banana	cytosol	81.25	81.46
EER88596	Sorghum	cytosol, plastid	67.45	71.94
VIT_04s0008g04780.t01	Wine grape	cytosol	69.53	70.26
Os06t0597200-01	Rice	cytosol	66.93	70.03
Zm00001d046450_P001	Maize	cytosol, plastid	65.36	69.72
TraesCS7A01G371100.1	Wheat	plastid	64.84	69.17
TraesCS7B01G256300.1	Wheat	mitochondrion, plastid	64.84	68.78
HORVU7Hr1G085010.2	Barley	plastid	65.1	68.49
TraesCS7D01G351600.1	Wheat	cytosol, plastid	64.84	68.03
KRH61828	Soybean	cytosol	64.84	67.3
KRH52505	Soybean	cytosol	64.32	66.76
Solyc06g065610.2.1	Tomato	plastid	63.54	65.07
PGSC0003DMT400067098	Potato	cytosol, plastid	63.28	64.8
AT2G25620.2	Thale cress	nucleus	61.46	60.2
CDX76745	Canola	nucleus	59.11	57.91
Bra007784.1-P	Field mustard	nucleus	58.85	57.65
CDY11515	Canola	mitochondrion	56.77	57.37
GSMUA_Achr3P13350_001	Banana	cytosol	41.41	54.08
GSMUA_Achr7P20900_001	Banana	nucleus	44.53	47.77
GSMUA_AchrUn_...	Banana	cytosol	36.2	47.12
GSMUA_Achr11P...	Banana	plastid	45.57	47.04
GSMUA_Achr5P11730_001	Banana	cytosol, mitochondrion, nucleus	46.88	47.0
GSMUA_Achr9P23890_001	Banana	plastid	45.57	46.67
GSMUA_Achr4P25900_001	Banana	cytosol	44.79	45.03
GSMUA_Achr10P...	Banana	cytosol	42.45	40.75
GSMUA_Achr8P22250_001	Banana	cytosol	39.06	40.65
GSMUA_AchrUn_...	Banana	cytosol	45.57	38.98
GSMUA_Achr3P08410_001	Banana	cytosol	41.41	38.97
GSMUA_Achr10P...	Banana	cytosol	25.78	29.55
GSMUA_Achr9P21740_001	Banana	cytosol, endoplasmic reticulum, peroxisome	23.96	29.11
GSMUA_Achr4P12780_001	Banana	cytosol	26.04	28.09
GSMUA_Achr6P03990_001	Banana	plastid	26.04	22.08
GSMUA_Achr4P13340_001	Banana	cytosol, peroxisome, plastid	26.04	15.08

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr10G28320_001	EnsemblPlants:GSMUA_Achr10P28320_001	EnsemblPlants:GSMUA_Achr10T28320_001	InterPro:IPR001932	InterPro:IPR036457	UniProt:M0RM56
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF346	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002955D34
SEG:seg	:	:	:	:	:

Description

Probable protein phosphatase 2C 57 [Source:GMGC_GENE;Acc:GSMUA_Achr10G28320_001]

Coordinates

chr10:+:31178063..31182964

Molecular Weight (calculated)

41462.6 Da

IEP (calculated)

4.574

GRAVY (calculated)

-0.344

Length

384 amino acids

Sequence
(BLAST)

001: MEGSLGDGGG GAVGKNGERS DGRPPNPFAG AYRQSYDVAL GGSPGVATLI RHGSLTKTEG LDVPVEDEKS NEDFETDFLP IVRSGAWADI GIRPTMEDAY
101: VCCDNFIQEY GLKNSGGPNA FYGVFDGHGG KHAADFACSN LPRFLLEDED FPGEIERAVA SAFLQTDTAF AEACSVNSSL ASGTTALAAL VVGRSLVVAN
201: AGDCRAVLCR RGKAIDMSHD HKPDRSEERK RIEALGGFVC DDYLNGLLNV ARAIGDWHVD GMKDRDGLGP LSAEPEVMTR RLTEEDEFLI LGCDGFWDVF
301: RSQNAVDLAR RKLQEHNDPT TCCKELVDEA LKRESSDNLA VVLVCFQTKP PPVMTAPRPR VRRSISGEGL RELQSFLDRL ADGA

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.