Factsheet for GSMUA_Achr7P20900_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052018_P001	Maize	cytosol	53.07	69.85
Os02t0799000-01	Rice	cytosol, plastid	68.99	69.77
EES05962	Sorghum	cytosol	68.99	69.58
EER89322	Sorghum	cytosol	68.72	69.49
Zm00001d018394_P003	Maize	endoplasmic reticulum, vacuole	65.64	69.12
TraesCS6A01G363900.1	Wheat	cytosol	67.88	69.03
VIT_11s0118g00700.t01	Wine grape	cytosol	68.44	68.82
TraesCS6B01G398500.1	Wheat	cytosol	66.76	67.9
Zm00001d045128_P001	Maize	cytosol	66.76	67.51
Os06t0179700-01	Rice	cytosol, plastid	67.88	67.5
TraesCS7A01G143200.2	Wheat	cytosol	64.8	65.72
TraesCS7D01G144400.3	Wheat	cytosol	64.53	65.44
GSMUA_Achr3P13350_001	Banana	cytosol	53.63	65.31
TraesCS7B01G045100.1	Wheat	cytosol	64.25	65.16
Solyc12g010450.1.1	Tomato	cytosol, nucleus, peroxisome	56.7	64.24
HORVU7Hr1G029330.7	Barley	plastid	62.85	63.56
KRH03568	Soybean	cytosol	67.32	62.92
KRH20243	Soybean	cytosol	67.32	62.92
PGSC0003DMT400020228	Potato	cytosol	66.48	62.14
HORVU6Hr1G086560.2	Barley	mitochondrion	67.32	61.95
KRH12874	Soybean	cytosol	65.08	61.48
PGSC0003DMT400078867	Potato	nucleus	65.36	61.1
Solyc07g007220.2.1	Tomato	nucleus	65.08	60.84
KRH37886	Soybean	cytosol	64.53	60.63
GSMUA_AchrUn_...	Banana	cytosol	38.27	46.44
GSMUA_Achr7P08470_001	Banana	cytosol	49.16	45.95
GSMUA_Achr10P...	Banana	cytosol	47.77	44.53
GSMUA_Achr11P...	Banana	plastid	45.81	44.09
GSMUA_Achr4P25900_001	Banana	cytosol	46.09	43.19
GSMUA_Achr9P23890_001	Banana	plastid	44.41	42.4
GSMUA_Achr5P11730_001	Banana	cytosol, mitochondrion, nucleus	45.25	42.3
GSMUA_Achr8P22250_001	Banana	cytosol	40.78	39.57
GSMUA_Achr10P...	Banana	cytosol	43.58	39.0
GSMUA_Achr3P08410_001	Banana	cytosol	43.02	37.75
GSMUA_AchrUn_...	Banana	cytosol	46.09	36.75
GSMUA_Achr10P...	Banana	cytosol	25.14	26.87
GSMUA_Achr9P21740_001	Banana	cytosol, endoplasmic reticulum, peroxisome	22.91	25.95
GSMUA_Achr4P12780_001	Banana	cytosol	25.14	25.28
GSMUA_Achr6P03990_001	Banana	plastid	25.98	20.53
GSMUA_Achr4P13340_001	Banana	cytosol, peroxisome, plastid	25.98	14.03

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:15.5.38	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr7G20900_001	EnsemblPlants:GSMUA_Achr7P20900_001	EnsemblPlants:GSMUA_Achr7T20900_001	InterPro:IPR001932	InterPro:IPR036457	UniProt:M0TJC7
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF299	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI000295A334	SEG:seg	:	:	:	:

Description

Probable protein phosphatase 2C 27 [Source:GMGC_GENE;Acc:GSMUA_Achr7G20900_001]

Coordinates

chr7:-:23850308..23854091

Molecular Weight (calculated)

39810.0 Da

IEP (calculated)

4.869

GRAVY (calculated)

-0.374

Length

358 amino acids

Sequence
(BLAST)

001: MCVDKNQVEE GESCEGLEFS ENQTERSPDS EKPCMERICE NSTTVNSGLK ESVDFVPVIR SGEWSDIGGR DRMEDTHVCI SDLAKKFGYH STDESVISFY
101: GVFDGHGGQG AAHFVRDNLP RVIVEDADFP LELEKVVTRS FKQTDTQFAR TCDLESSLSS GTTALTAMIF GRSLLVANAG DCRAVLSRLG TAVEMSKDHR
201: PCCINEQTRV KSLGGSINYG YLNDQLEVTR ALGDWHLQGM KEIGEPGGPL SAEPELKMVT LTKEDEFLII CSDGIWEVFT SQNAVDFARR QLREHNDVKL
301: CCKELVQEAL RRGATDNLTA VMVCFHLELP SKTKVQRTRV HRSISAEGLH YLRSILEG

Best Arabidopsis Sequence Match ( AT2G25620.1 )
(BLAST)

001: MEETRGISDP ENGSSSYGGK PPNPLSFSSS SAAAAVYRQT FDGERSLAPC NKRSLVRHSS LVKTMVSDIS VENEFTIEKN KSEFVPATRS GAWSDIGSRS
101: SMEDAYLCVD NFMDSFGLLN SEAGPSAFYG VFDGHGGKHA AEFACHHIPR YIVEDQEFPS EINKVLSSAF LQTDTAFLEA CSLDGSLASG TTALAAILFG
201: RSLVVANAGD CRAVLSRQGK AIEMSRDHKP MSSKERRRIE ASGGHVFDGY LNGQLNVARA LGDFHMEGMK KKKDGSDCGP LIAEPELMTT KLTEEDEFLI
301: IGCDGVWDVF MSQNAVDFAR RRLQEHNDPV MCSKELVEEA LKRKSADNVT AVVVCLQPQP PPNLVAPRLR VHRSFSAEGL KDLQSYLDGL GN

Arabidopsis Description

AtDBP1Probable protein phosphatase 2C 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.