Factsheet for GSMUA_Achr4P12780_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61652	Soybean	cytosol	44.94	82.9
KRH52312	Soybean	cytosol	78.93	81.45
CDX72331	Canola	cytosol	79.78	80.68
GSMUA_Achr10P...	Banana	cytosol	75.84	80.6
CDY13457	Canola	cytosol	79.21	80.11
Os02t0180000-01	Rice	cytosol, plasma membrane	80.34	79.01
EES04637	Sorghum	cytosol	79.21	78.55
AT4G31860.1	Thale cress	cytosol	77.53	77.31
KRH15637	Soybean	cytosol	71.91	75.52
VIT_04s0008g06720.t01	Wine grape	cytosol, extracellular, mitochondrion	83.15	75.32
Solyc08g006060.2.1	Tomato	cytosol	71.63	75.0
Os06t0651600-01	Rice	cytosol	77.25	74.73
Bra023979.1-P	Field mustard	cytosol	78.65	74.67
AT2G25070.2	Thale cress	nucleus	74.44	74.65
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	78.93	73.95
Zm00001d036710_P001	Maize	extracellular	75.56	73.7
CDX76775	Canola	nucleus	73.88	73.67
EER90135	Sorghum	cytosol	75.56	73.5
KRH47317	Soybean	cytosol	75.84	73.37
KRH44580	Soybean	endoplasmic reticulum	75.56	73.1
TraesCS6D01G137200.1	Wheat	golgi	79.21	71.94
KRH05380	Soybean	golgi	71.91	71.91
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	79.21	71.21
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	79.21	71.21
Zm00001d015504_P004	Maize	extracellular	80.06	71.07
TraesCS7A01G504800.1	Wheat	cytosol	79.21	70.85
Bra007820.1-P	Field mustard	nucleus	73.88	70.7
Bra032043.1-P	Field mustard	nucleus	72.19	70.6
HORVU7Hr1G113110.1	Barley	cytosol	78.93	70.6
CDY53471	Canola	nucleus	71.91	70.33
CDY64720	Canola	nucleus	71.91	70.14
CDY64719	Canola	nucleus	71.91	70.14
TraesCS7B01G411900.1	Wheat	cytosol	78.93	68.37
TraesCS7D01G492000.1	Wheat	nucleus	78.93	68.37
Solyc08g074230.1.1	Tomato	cytosol, nucleus, peroxisome	51.97	68.27
Zm00001d046828_P003	Maize	cytosol	76.97	68.16
VIT_09s0018g01140.t01	Wine grape	nucleus	67.7	67.32
KRH61653	Soybean	cytosol	25.56	66.91
Zm00001d046831_P002	Maize	cytosol	76.12	66.58
CDY34740	Canola	nucleus	73.6	66.16
Solyc12g042570.1.1	Tomato	nucleus	58.71	62.57
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	18.82	60.91
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	26.69	59.75
GSMUA_Achr6P03990_001	Banana	plastid	74.44	58.5
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	18.54	55.0
GSMUA_AchrUn_...	Banana	cytosol	25.28	30.51
GSMUA_Achr3P13350_001	Banana	cytosol	23.88	28.91
GSMUA_Achr7P08470_001	Banana	cytosol	29.21	27.15
GSMUA_Achr9P21740_001	Banana	cytosol, endoplasmic reticulum, peroxisome	23.6	26.58
GSMUA_Achr10P...	Banana	cytosol	28.09	26.04
GSMUA_Achr7P20900_001	Banana	nucleus	25.28	25.14
GSMUA_Achr9P23890_001	Banana	plastid	26.12	24.8
GSMUA_Achr11P...	Banana	plastid	25.84	24.73
GSMUA_Achr8P22250_001	Banana	cytosol	25.56	24.66
GSMUA_Achr10P...	Banana	cytosol	27.53	24.5
GSMUA_Achr5P11730_001	Banana	cytosol, mitochondrion, nucleus	26.12	24.28
GSMUA_Achr3P08410_001	Banana	cytosol	26.97	23.53
GSMUA_Achr4P25900_001	Banana	cytosol	24.72	23.04
GSMUA_AchrUn_...	Banana	cytosol	25.84	20.49
GSMUA_Achr4P13340_001	Banana	cytosol, peroxisome, plastid	26.12	14.03

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.9	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr4G12780_001
EnsemblPlants:GSMUA_Achr4P12780_001	EnsemblPlants:GSMUA_Achr4T12780_001	InterPro:IPR001932	InterPro:IPR036457	UniProt:M0SNE3	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF385	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002952C14	:

Description

Probable protein phosphatase 2C 11 [Source:GMGC_GENE;Acc:GSMUA_Achr4G12780_001]

Coordinates

chr4:+:9465378..9476839

Molecular Weight (calculated)

38847.6 Da

IEP (calculated)

4.789

GRAVY (calculated)

-0.406

Length

356 amino acids

Sequence
(BLAST)

001: MGIYLSTPKT EKFSEDGESD RLRFGLSSMQ GWRATMEDAH AALPDLDDCT SFFGVYDGHG GKVVAKFCAK YLHTQVLKNE ASSTGDLGTS VQRAFLRMDE
101: MMQGQRGWRE LAVLGDKINK FTGMIEGLIW SPRGSDSNNH EDDWAFEEGP HSDFSGPTSG STACVAIMRG NQLVVANAGD SRCVISRKGQ AYNLSRDHKP
201: ELDAERERIL KAGGFIHGGR VNGSLNLARA IGDMEFKQNK FLPVEKQIVT ANPDVNNVEL CDDDDFIVLA CDGIWDCMSS QQLVNFIHEH INKETSLSAV
301: CEKVLDRCLA PSTLGGEGCD NMTMILVQFK KPINSNAASA EQSTQATPGS ESSSAD

Best Arabidopsis Sequence Match ( AT4G31860.1 )
(BLAST)

001: MGIYLSTPKT DKFSEDGENH KLRYGLSSMQ GWRASMEDAH AAILDLDDNT SFLGVYDGHG GKVVSKFCAK YLHQQVLSDE AYAAGDVGTS LQKAFFRMDE
101: MMQGQRGWRE LAVLGDKINK FSGMIEGLIW SPRSGDSANK PDAWAFEEGP HSDFAGPNSG STACVAVVRD KQLFVANAGD SRCVISRKNQ AYNLSRDHKP
201: DLEAEKERIL KAGGFIHAGR VNGSLNLSRA IGDMEFKQNK FLPSEKQIVT ASPDVNTVEL CDDDDFLVLA CDGIWDCMTS QQLVDFIHEQ LNSETKLSVV
301: CEKVLDRCLA PNTSGGEGCD NMTMILVRFK NPTPSETELK PEASQAEGNH DEPSSSN

Arabidopsis Description

Probable protein phosphatase 2C 60 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.