Factsheet for VIT_09s0018g01140.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P12780_001	Banana	cytosol	67.32	67.7
GSMUA_Achr10P...	Banana	cytosol	63.13	67.46
KRH47317	Soybean	cytosol	65.64	63.86
KRH44580	Soybean	endoplasmic reticulum	65.64	63.86
VIT_04s0008g06720.t01	Wine grape	cytosol, extracellular, mitochondrion	69.83	63.61
EES04637	Sorghum	cytosol	63.41	63.23
Os06t0651600-01	Rice	cytosol	63.69	61.96
Os02t0180000-01	Rice	cytosol, plasma membrane	62.57	61.88
Solyc12g042570.1.1	Tomato	nucleus	57.54	61.68
Zm00001d036710_P001	Maize	extracellular	61.73	60.55
EER90135	Sorghum	cytosol	61.73	60.38
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	62.85	59.21
HORVU7Hr1G113110.1	Barley	cytosol	63.69	57.29
TraesCS6D01G137200.1	Wheat	golgi	62.57	57.14
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	63.13	57.07
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	62.85	56.82
TraesCS7A01G504800.1	Wheat	cytosol	63.13	56.78
Zm00001d015504_P004	Maize	extracellular	63.13	56.36
TraesCS7D01G492000.1	Wheat	nucleus	63.97	55.72
TraesCS7B01G411900.1	Wheat	cytosol	63.69	55.47
Zm00001d046828_P003	Maize	cytosol	61.17	54.48
Zm00001d046831_P002	Maize	cytosol	60.06	52.83
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	15.36	50.0
GSMUA_Achr6P03990_001	Banana	plastid	62.57	49.45
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	21.23	47.8
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	14.8	44.17
VIT_11s0118g00700.t01	Wine grape	cytosol	25.14	25.28
VIT_07s0031g02160.t01	Wine grape	cytosol	25.14	24.93
VIT_07s0005g02110.t01	Wine grape	cytosol	27.09	24.62
VIT_04s0008g04780.t01	Wine grape	cytosol	25.7	24.21
VIT_17s0000g03100.t01	Wine grape	cytosol, peroxisome, plastid	25.14	23.81
VIT_18s0122g01010.t01	Wine grape	cytosol	25.14	23.38
VIT_05s0020g00390.t01	Wine grape	plastid	24.02	22.05
VIT_08s0040g00760.t01	Wine grape	cytosol	24.86	13.51

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100248342	wikigene:100248342	MapMan:18.4.24.2.9	Gene3D:3.60.40.10
ProteinID:CCB49692	ProteinID:CCB49692.1	UniProt:F6HBX4	EMBL:FN595513	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	EntrezGene:LOC100248342	wikigene:LOC100248342	PFAM:PF00481	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF385	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00021095D1	ArrayExpress:VIT_09s0018g01140
EnsemblPlantsGene:VIT_09s0018g01140	EnsemblPlants:VIT_09s0018g01140.t01	unigene:Vvi.9195	RefSeq:XP_002268545	RefSeq:XP_002268545.1	:

Description

No Description!

Coordinates

chr9:+:17855537..17879946

Molecular Weight (calculated)

39266.9 Da

IEP (calculated)

4.658

GRAVY (calculated)

-0.544

Length

358 amino acids

Sequence
(BLAST)

001: MGIYLSSPRK EKSSEDGENA RVRYGLSSMQ GWRTTMEDAH AAYPDLDSST SFFAVYDGHG GVARFCAKYL HEQVLKNEAC SAGDLGGSVR KAFLRMDEMM
101: RGERGWRELA KFEDRVDRFS RINYDSMCSP MSDEFNDQND DWTEEGPNYD FRGPNSGSTA CVAIIRGDQL LVANAGDSRC VLSRAGEAYD LSTDHKPELQ
201: EEKERILKAG GCIQHGRVNG VLNLARAIGD NEFKMNKSLP AEKQMVTANP EINTASLCND DDFMVLACDG IWDCMTSQEL VEFVHEQLNS GCKLSAVCEK
301: VLDKCLAPSS GGEGCDNMTM ILVQFKKPIH SSASAGKQEP LPSDIPSGSN QAPTGTNS

Best Arabidopsis Sequence Match ( AT4G31860.1 )
(BLAST)

001: MGIYLSTPKT DKFSEDGENH KLRYGLSSMQ GWRASMEDAH AAILDLDDNT SFLGVYDGHG GKVVSKFCAK YLHQQVLSDE AYAAGDVGTS LQKAFFRMDE
101: MMQGQRGWRE LAVLGDKINK FSGMIEGLIW SPRSGDSANK PDAWAFEEGP HSDFAGPNSG STACVAVVRD KQLFVANAGD SRCVISRKNQ AYNLSRDHKP
201: DLEAEKERIL KAGGFIHAGR VNGSLNLSRA IGDMEFKQNK FLPSEKQIVT ASPDVNTVEL CDDDDFLVLA CDGIWDCMTS QQLVDFIHEQ LNSETKLSVV
301: CEKVLDRCLA PNTSGGEGCD NMTMILVRFK NPTPSETELK PEASQAEGNH DEPSSSN

Arabidopsis Description

Probable protein phosphatase 2C 60 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.