Factsheet for VIT_07s0005g02110.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g068000.2.1	Tomato	cytosol	68.02	76.14
PGSC0003DMT400018825	Potato	cytosol	67.26	75.28
Solyc06g009390.2.1	Tomato	cytosol	67.01	75.0
PGSC0003DMT400013370	Potato	cytosol	67.01	75.0
KRH69165	Soybean	cytosol	73.6	73.23
KRH31749	Soybean	cytosol	73.35	72.98
GSMUA_AchrUn_...	Banana	cytosol	51.52	68.81
GSMUA_Achr10P...	Banana	cytosol	65.74	64.75
GSMUA_Achr8P22250_001	Banana	cytosol	59.39	63.41
GSMUA_Achr3P08410_001	Banana	cytosol	64.97	62.75
TraesCS5D01G089900.1	Wheat	cytosol	60.15	62.04
TraesCS5A01G076600.1	Wheat	cytosol	60.41	61.98
TraesCS5B01G082500.1	Wheat	cytosol	60.15	61.88
Os01t0295700-01	Rice	cytosol	59.39	61.58
Os05t0134200-01	Rice	cytosol	59.9	60.67
VIT_05s0020g00390.t01	Wine grape	plastid	59.64	60.26
TraesCS1D01G079600.1	Wheat	cytosol	57.87	59.69
HORVU1Hr1G016640.2	Barley	cytosol	57.87	59.69
TraesCS1B01G095600.1	Wheat	cytosol	57.87	59.38
HORVU5Hr1G020300.3	Barley	plastid	58.12	59.17
TraesCS1A01G077500.1	Wheat	cytosol	57.61	59.11
EES17660	Sorghum	cytosol, peroxisome, plastid	59.14	58.1
Zm00001d008171_P001	Maize	cytosol	58.12	57.83
EES02832	Sorghum	cytosol	58.12	57.11
Zm00001d024732_P001	Maize	cytosol	58.38	56.79
VIT_18s0122g01010.t01	Wine grape	cytosol	46.19	47.27
VIT_07s0031g02160.t01	Wine grape	cytosol	42.89	46.81
VIT_11s0118g00700.t01	Wine grape	cytosol	40.61	44.94
VIT_04s0008g04780.t01	Wine grape	cytosol	40.86	42.37
VIT_09s0018g01140.t01	Wine grape	nucleus	24.62	27.09
VIT_17s0000g03100.t01	Wine grape	cytosol, peroxisome, plastid	24.87	25.93
VIT_04s0008g06720.t01	Wine grape	cytosol, extracellular, mitochondrion	24.87	24.94
VIT_08s0040g00760.t01	Wine grape	cytosol	29.19	17.45

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100246961	wikigene:100246961	MapMan:15.5.38	Gene3D:3.60.40.10
EMBL:AM460550	ProteinID:CAN76927	ProteinID:CAN76927.1	ProteinID:CBI37006	ProteinID:CBI37006.3	UniProt:D7U2P0
EMBL:FN596502	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	EntrezGene:LOC100246961
wikigene:LOC100246961	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF165	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	TIGR:TC62295	UniParc:UPI00015CA616	ArrayExpress:VIT_07s0005g02110	EnsemblPlantsGene:VIT_07s0005g02110	EnsemblPlants:VIT_07s0005g02110.t01
unigene:Vvi.6760	RefSeq:XP_002279690	RefSeq:XP_002279690.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:+:4523066..4525657

Molecular Weight (calculated)

43529.2 Da

IEP (calculated)

4.476

GRAVY (calculated)

-0.230

Length

394 amino acids

Sequence
(BLAST)

001: MVAEAEVVCQ QRVPVLDVQY YARENNIEDV VAISTSLSSP SFDPICASDS VSADSSGTQV DIKSPEKNPD ATLESAIVQF VPCIRSGSFA DIGPRRYMED
101: EHIRIDDLSM HLGSVSRLPN PCAFYGVFDG HGGPEAAAYV RKNVDRFFFE DANFPRTSEV NDVFSERVEN SVRKAFLLAD LALADDSGVS SSSGTTALTA
201: LIFGRTLMVA NAGDCRAVLC RKGQAVDMSQ DHRPSYPLER KRVEELGGFV DGEYLNGVLS VTRALGDWDM KFPRGSASPL IAEPEFRQVA LTEEDEFLII
301: GCDGIWDVMS SQEAVSLVRR GLRRHDDPEQ SARDLVMEAL RLNTFDNLTV IVICFSSPDQ FEPTPPRQRR FRCCNISMEA LCSLRSLLDN NGNR

Best Arabidopsis Sequence Match ( AT3G62260.1 )
(BLAST)

001: MVAEAEVVFQ QSLPAVLEIE LFDGVSSAVK SPVSSPKLGF TQSTASVSGS LTTSPVADIF PEGDCDPSVL DYIPTIRSGS FADIGPKRNM EDEHIRIDDL
101: SSQVGSLFEL PKPSAFYAVF DGHGGPEAAA YVRENAIRFF FEDEQFPQTS EVSSVYVEEV ETSLRNAFLQ ADLALAEDCS ISDSCGTTAL TALICGRLLM
201: VANAGDCRAV LCRKGRAIDM SEDHKPINLL ERRRVEESGG FITNDGYLNE VLAVTRALGD WDLKLPHGSQ SPLISEPEIK QITLTEDDEF LVIGCDGIWD
301: VLTSQEAVSI VRRGLNRHND PTRCARELVM EALGRNSFDN LTAVVVCFMT MDRGDKPVVP LEKRRCFSLS PEAFCSLRNL LDG

Arabidopsis Description

Probable protein phosphatase 2C 49 [Source:UniProtKB/Swiss-Prot;Acc:Q3EAF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.