Factsheet for VIT_04s0008g06720.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P12780_001	Banana	cytosol	75.32	83.15
GSMUA_Achr10P...	Banana	cytosol	69.21	81.19
CDX72331	Canola	cytosol	72.52	80.97
CDY13457	Canola	cytosol	72.52	80.97
Solyc08g006060.2.1	Tomato	cytosol	68.45	79.12
AT4G31860.1	Thale cress	cytosol	71.5	78.71
Os02t0180000-01	Rice	cytosol, plasma membrane	72.01	78.18
EES04637	Sorghum	cytosol	70.48	77.16
Bra023979.1-P	Field mustard	cytosol	72.01	75.47
Os06t0651600-01	Rice	cytosol	70.23	75.0
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	71.5	73.95
Zm00001d036710_P001	Maize	extracellular	67.94	73.15
EER90135	Sorghum	cytosol	67.43	72.4
TraesCS6D01G137200.1	Wheat	golgi	71.5	71.68
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	71.76	71.21
Solyc08g074230.1.1	Tomato	cytosol, nucleus, peroxisome	48.85	70.85
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	71.25	70.71
TraesCS7A01G504800.1	Wheat	cytosol	70.99	70.1
HORVU7Hr1G113110.1	Barley	cytosol	70.99	70.1
VIT_09s0018g01140.t01	Wine grape	nucleus	63.61	69.83
Zm00001d015504_P004	Maize	extracellular	70.48	69.08
TraesCS7B01G411900.1	Wheat	cytosol	71.25	68.13
TraesCS7D01G492000.1	Wheat	nucleus	71.25	68.13
Zm00001d046828_P003	Maize	cytosol	67.94	66.42
Zm00001d046831_P002	Maize	cytosol	66.92	64.62
Zm00001d018815_P001	Maize	cytosol, mitochondrion, peroxisome	17.3	61.82
GSMUA_Achr6P03990_001	Banana	plastid	70.48	61.15
Zm00001d047200_P003	Maize	golgi, mitochondrion, peroxisome	23.66	58.49
Zm00001d039151_P002	Maize	cytosol, mitochondrion, peroxisome	16.79	55.0
VIT_04s0008g04780.t01	Wine grape	cytosol	24.94	25.79
VIT_11s0118g00700.t01	Wine grape	cytosol	23.16	25.56
VIT_07s0031g02160.t01	Wine grape	cytosol	23.41	25.48
VIT_17s0000g03100.t01	Wine grape	cytosol, peroxisome, plastid	24.43	25.4
VIT_07s0005g02110.t01	Wine grape	cytosol	24.94	24.87
VIT_18s0122g01010.t01	Wine grape	cytosol	23.66	24.16
VIT_05s0020g00390.t01	Wine grape	plastid	21.63	21.79
VIT_08s0040g00760.t01	Wine grape	cytosol	22.9	13.66

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100261065	wikigene:100261065	MapMan:18.4.24.2.9	Gene3D:3.60.40.10
EMBL:AM427863	ProteinID:CAN60286	ProteinID:CAN60286.1	ProteinID:CCB46870	ProteinID:CCB46870.1	UniProt:F6H341
EMBL:FN595231	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	EntrezGene:LOC100261065
wikigene:LOC100261065	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF385	SMART:SM00331	SMART:SM00332
SUPFAM:SSF81606	TIGR:TC63215	UniParc:UPI0002109A82	ArrayExpress:VIT_04s0008g06720	EnsemblPlantsGene:VIT_04s0008g06720	EnsemblPlants:VIT_04s0008g06720.t01
unigene:Vvi.8865	RefSeq:XP_002285549	RefSeq:XP_002285549.1	:	:	:

Description

No Description!

Coordinates

chr4:-:6710215..6725435

Molecular Weight (calculated)

43187.0 Da

IEP (calculated)

4.764

GRAVY (calculated)

-0.377

Length

393 amino acids

Sequence
(BLAST)

001: MKEIYSLNLM QPYGALAFTQ SDDASRTTSL LRSVLEMGIY LSTPKTEKLS EDGENGRVRY GLSSMQGWRA TMEDAHAAYP DLDASTSFFG VYDGHGGKVV
101: AKFCAKYLHQ QVLKNEAYTA GDLGTSVQKS FFRMDEMMRG QRGWRELAVL GDKINKFTGM IEGLIWSPRS SSDGNDHVDD WAFEEGPHSD FAGPTSGSTA
201: CVAIIRNNQL VVANAGDSRC VISRKGQAYN LSRDHKPDLE VEKERILKAG GFIHAGRVNG SLNLARAIGD MEFKQNKFLP PEKQIVTANP DINTVELCDD
301: DDFIVLACDG IWDCMSSQQL VDFIQEQLIL ESKLSAVCER VLDRCLAPST AGGEGCDNMT MILVQFKKPI TATPSGEQSS SCNQADTEPK PTE

Best Arabidopsis Sequence Match ( AT4G31860.1 )
(BLAST)

001: MGIYLSTPKT DKFSEDGENH KLRYGLSSMQ GWRASMEDAH AAILDLDDNT SFLGVYDGHG GKVVSKFCAK YLHQQVLSDE AYAAGDVGTS LQKAFFRMDE
101: MMQGQRGWRE LAVLGDKINK FSGMIEGLIW SPRSGDSANK PDAWAFEEGP HSDFAGPNSG STACVAVVRD KQLFVANAGD SRCVISRKNQ AYNLSRDHKP
201: DLEAEKERIL KAGGFIHAGR VNGSLNLSRA IGDMEFKQNK FLPSEKQIVT ASPDVNTVEL CDDDDFLVLA CDGIWDCMTS QQLVDFIHEQ LNSETKLSVV
301: CEKVLDRCLA PNTSGGEGCD NMTMILVRFK NPTPSETELK PEASQAEGNH DEPSSSN

Arabidopsis Description

Probable protein phosphatase 2C 60 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.