CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015504_P004	Maize	extracellular	96.1	86.03
Os02t0180000-01	Rice	cytosol, plasma membrane	84.68	83.98
GSMUA_Achr4P12780_001	Banana	cytosol	78.55	79.21
HORVU6Hr1G029160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	83.84	79.21
KRH61652	Soybean	cytosol	41.78	77.72
TraesCS6D01G137200.1	Wheat	golgi	84.68	77.55
EER90135	Sorghum	cytosol	78.83	77.32
TraesCS6B01G176200.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	84.96	77.02
KRH52312	Soybean	cytosol	73.82	76.81
TraesCS6A01G147900.4	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	84.68	76.77
GSMUA_Achr10P...	Banana	cytosol	70.19	75.22
CDX72331	Canola	cytosol	72.98	74.43
CDY13457	Canola	cytosol	72.98	74.43
KRH15637	Soybean	cytosol	69.08	73.16
Solyc08g006060.2.1	Tomato	cytosol	67.69	71.47
AT4G31860.1	Thale cress	cytosol	71.03	71.43
CDX76775	Canola	nucleus	70.75	71.15
AT2G25070.2	Thale cress	nucleus	70.19	70.99
VIT_04s0008g06720.t01	Wine grape	cytosol, extracellular, mitochondrion	77.16	70.48
Bra023979.1-P	Field mustard	cytosol	72.42	69.33
KRH05380	Soybean	golgi	67.97	68.54
KRH44580	Soybean	endoplasmic reticulum	69.92	68.21
Bra007820.1-P	Field mustard	nucleus	70.19	67.74
Bra032043.1-P	Field mustard	nucleus	68.52	67.58
CDY64719	Canola	nucleus	68.52	67.4
CDY64720	Canola	nucleus	68.52	67.4
KRH47317	Soybean	cytosol	69.08	67.39
CDY53471	Canola	nucleus	68.25	67.31
Solyc08g074230.1.1	Tomato	cytosol, nucleus, peroxisome	48.75	64.58
KXG36172	Sorghum	cytosol	65.18	64.46
CDY34740	Canola	nucleus	70.19	63.64
VIT_09s0018g01140.t01	Wine grape	nucleus	63.23	63.41
KRH61653	Soybean	cytosol	23.68	62.5
Solyc12g042570.1.1	Tomato	nucleus	55.71	59.88
GSMUA_Achr6P03990_001	Banana	plastid	68.52	54.3
KXG26265	Sorghum	cytosol	33.43	34.88
OQU81890	Sorghum	plastid	37.33	30.32
KXG30563	Sorghum	mitochondrion	34.26	30.0
EES05962	Sorghum	cytosol	25.63	25.92
EER89322	Sorghum	cytosol	25.35	25.71
EER88596	Sorghum	cytosol, plastid	25.63	25.56
KXG39006	Sorghum	plastid	25.91	25.0
EER98699	Sorghum	cytosol, peroxisome, plastid	24.51	24.44
KXG32675	Sorghum	cytosol	3.9	22.22
EES02832	Sorghum	cytosol	24.51	21.95
EES17660	Sorghum	cytosol, peroxisome, plastid	24.51	21.95
KXG32674	Sorghum	mitochondrion, nucleus, peroxisome	7.52	12.5

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.9	EntrezGene:8077623	UniProt:C5XWV1	EnsemblPlants:EES04637
ProteinID:EES04637	ProteinID:EES04637.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF385	SMART:SM00332	EnsemblPlantsGene:SORBI_3004G065200	SUPFAM:SSF81606
unigene:Sbi.3374	UniParc:UPI0001A8565F	RefSeq:XP_002451661.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:5259979..5265926

Molecular Weight (calculated)

39215.4 Da

IEP (calculated)

5.296

GRAVY (calculated)

-0.341

Length

359 amino acids

Sequence
(BLAST)

001: MGVYLSTPKT DKLSENGEND RLKFGLSSMQ GWRATMEDAH SALLDLDSET AFFGVFDGHG GRVVAKFCAK YLHGQVLKSE AYSAGDLGAA VHRAFFRMDE
101: MMRGQRGWRE LSALGDKINK FSGMIEGLIW SPRGSDSNSQ QDDWASEEGP HSDFAGPTCG STACVALIRN SQLVVANAGD SRCVISRGGK AYNLSRDHKP
201: ELAVERERIM KAGGFIHMGR VNGSLNLSRA IGDVELKQNK FLPPEKQIVT ANPDINVVEL CDDDDFVVVA CDGIWDCMSS QQLVDFIHER INMESSLSAV
301: CERVLDRCLA PSTIGGDGCD NMTMILVQIK KPVNRNKKAE VAGQSANNAD EVKSRVAEE

Best Arabidopsis Sequence Match ( AT4G31860.1 )
(BLAST)

001: MGIYLSTPKT DKFSEDGENH KLRYGLSSMQ GWRASMEDAH AAILDLDDNT SFLGVYDGHG GKVVSKFCAK YLHQQVLSDE AYAAGDVGTS LQKAFFRMDE
101: MMQGQRGWRE LAVLGDKINK FSGMIEGLIW SPRSGDSANK PDAWAFEEGP HSDFAGPNSG STACVAVVRD KQLFVANAGD SRCVISRKNQ AYNLSRDHKP
201: DLEAEKERIL KAGGFIHAGR VNGSLNLSRA IGDMEFKQNK FLPSEKQIVT ASPDVNTVEL CDDDDFLVLA CDGIWDCMTS QQLVDFIHEQ LNSETKLSVV
301: CEKVLDRCLA PNTSGGEGCD NMTMILVRFK NPTPSETELK PEASQAEGNH DEPSSSN

Arabidopsis Description

Probable protein phosphatase 2C 60 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ53]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.