CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025780_P001	Maize	cytosol	66.74	80.82
KXG26265	Sorghum	cytosol	57.69	74.13
Os04t0500900-00	Rice	plasma membrane	33.94	51.9
HORVU2Hr1G086370.2	Barley	cytosol	38.91	44.56
TraesCS2B01G374900.1	Wheat	cytosol	38.46	44.5
TraesCS2A01G354400.1	Wheat	cytosol	38.46	44.5
TraesCS2D01G354600.1	Wheat	cytosol	38.69	44.42
KXG36172	Sorghum	cytosol	31.22	38.02
EES04637	Sorghum	cytosol	30.32	37.33
EER90135	Sorghum	cytosol	30.77	37.16
KXG30563	Sorghum	mitochondrion	26.92	29.02
EER88596	Sorghum	cytosol, plastid	20.36	25.0
KXG39006	Sorghum	plastid	21.04	25.0
EES05962	Sorghum	cytosol	19.91	24.79
EER98699	Sorghum	cytosol, peroxisome, plastid	18.78	23.06
EER89322	Sorghum	cytosol	18.33	22.88
EES02832	Sorghum	cytosol	20.36	22.44
KXG32675	Sorghum	cytosol	3.17	22.22
EES17660	Sorghum	cytosol, peroxisome, plastid	20.14	22.19
KXG32674	Sorghum	mitochondrion, nucleus, peroxisome	4.52	9.26

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:35.1	UniProt:A0A1Z5RDQ7	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:OQU81890	ProteinID:OQU81890	ProteinID:OQU81890.1
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF285	SMART:SM00332	EnsemblPlantsGene:SORBI_3006G137000	SUPFAM:SSF81606
SignalP:SignalP-noTM	UniParc:UPI000B8BA1D6	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:49939413..49944773

Molecular Weight (calculated)

48395.9 Da

IEP (calculated)

5.637

GRAVY (calculated)

-0.361

Length

442 amino acids

Sequence
(BLAST)

001: MGRPHSLILS LAQSLSLSLS LSYEDSPGSR ISSFAMALAV PVTLKTTEEG GNERFDYAVS AMQGYRQNME DAHAIVLNLD AATGTSFFGV YDGHGGPAVS
101: KYCARHLHTE LLRHESFRDN LQTAIEGTFL RMDEMMKDRS AGWELSGYGG NDNWKAYKKA LRWSLLLPFF CQKPDYPGPE NDGCTACVVL MRGNQIIVGN
201: AGDSRCVLSR NNVAVTLSTD FKPSLDAERA RIVAAGHEVT FSERGNMHRI DDGIAVSRSL GDLLYKDKHD LDPQQQAITA FPEVRTEQIT QDDQFLIIAC
301: DGIWDCLSSQ QAVDFIRIYL NSDVGLAFIC EALLGHCLSH PRGRDNMTVV LVRFKTPGAC QVRLPRPINQ AAAARAAAEQ ERAAAEQERA AAEQEQAAEE
401: QERAATEQAA ATRAASTSAP SSPSFRRPKT EESPKSSKSS EL

Best Arabidopsis Sequence Match ( AT2G25070.1 )
(BLAST)

001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS

Arabidopsis Description

PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.