Factsheet for PGSC0003DMT400041953

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG32675	Sorghum	cytosol	24.76	80.95
Zm00001d009364_P001	Maize	cytosol	71.36	30.69
Solyc01g056690.2.1	Tomato	cytosol	91.26	28.79
VIT_08s0040g00760.t01	Wine grape	cytosol	78.16	24.43
KRH71677	Soybean	cytosol	72.82	22.76
TraesCS3B01G378000.1	Wheat	cytosol	68.93	21.71
HORVU3Hr1G047160.19	Barley	cytosol	68.45	21.46
Os01t0541900-01	Rice	cytosol	68.45	21.46
TraesCS3A01G200800.1	Wheat	cytosol	68.45	21.46
TraesCS3D01G203100.1	Wheat	cytosol	67.96	21.31
GSMUA_Achr4P13340_001	Banana	cytosol, peroxisome, plastid	66.5	20.66
CDY22485	Canola	cytosol	64.08	20.09
AT2G40860.1	Thale cress	plastid	64.08	20.06
Bra000209.1-P	Field mustard	cytosol	62.62	19.69
PGSC0003DMT400013370	Potato	cytosol	33.01	19.32
PGSC0003DMT400067098	Potato	cytosol, plastid	34.95	19.2
CDY35434	Canola	cytosol, plastid	60.68	19.03
PGSC0003DMT400018825	Potato	cytosol	31.07	18.18
PGSC0003DMT400003812	Potato	cytosol, mitochondrion	32.52	17.45
PGSC0003DMT400025874	Potato	cytosol	32.52	17.4
PGSC0003DMT400059610	Potato	cytosol	31.07	17.25
PGSC0003DMT400020228	Potato	cytosol	31.55	16.97
PGSC0003DMT400078867	Potato	nucleus	30.58	16.45
PGSC0003DMT400069839	Potato	cytosol	30.58	15.75
PGSC0003DMT400014727	Potato	peroxisome	22.82	13.91
KXG32674	Sorghum	mitochondrion, nucleus, peroxisome	6.8	6.48

Protein Annotations

EnsemblPlants:PGSC0003DMT400041953	EnsemblPlantsGene:PGSC0003DMG400016274	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001932
InterPro:IPR036457	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	PANTHER:PTHR45507
PFAM:PF00481	PFscan:PS51746	PGSC:PGSC0003DMG400016274	SEG:seg	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI00029615C5	UniProt:M1BC94	MapMan:18.4.1.31.3	:	:	:

Description

Protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400016274]

Coordinates

chr6:-:40127311..40133129

Molecular Weight (calculated)

22863.5 Da

IEP (calculated)

7.752

GRAVY (calculated)

-0.091

Length

206 amino acids

Sequence
(BLAST)

001: MSPSDALFEA FIKTDVTFRT QLDSSRKRKG AIQKDWHPGC TAIAALIIKN KLIVANASDC RAILCRSGIP YALSRDQVAS CLEERECIIR AGSLVKWQVD
101: TWRVGEAALQ VTRSINDDDL KRAVTAKPEI TSTTLSIEDE YIVIASDGLW DVVSEKDVVN IIRDTVKEAG MCSKRLATEA AERGRKDNIT VIVIFLRSVS
201: TAERIY

Best Arabidopsis Sequence Match ( AT2G40860.1 )
(BLAST)

001: MVMEIVKPNT CIRGCCTSES IPLHLPSSSF TLLSPIAKGS ESVVYEAILD GRRVAAKKPI LSTSDDLDKF HRNLQLSCNL NHPGVAKLLA AHAKPPNYMF
101: FFDFYESGTL AEKLHVEEWS PSIDQVLLIT LHLAKALQYL HNNGIVHRDV KPANVLLDEK FFPYLADFGL AEYKKNLREV NLQNWRSSGK PTGGFHKKNM
201: VGTLIYMAPE ILRKDMYTEK ADIYSFGILI NELLTGVVPY TDRRAEAQAH TVLEMNYTEQ QLTVAIVSSG LRPALAEIGL HLPKSLLSLI QNCWESDPSK
301: RPSSDNVVLE LESIWEQVRG KQQGHLLEKT SNSQSDTDGA DIIKNSGDYR DTVNWFSQGE CLSKKSSVST VFDVKLWSSS TDEPSRYVPV ISCGSFATCG
401: RRESMEDTHF IIPHMCNEES IHLFAIFDGH RGAAAAEFSA QVLPGLVQSL CSTSAGEALS QAFVRTDLAF RQELDSHRQS KRVSQKDWHP GCTAIASLLV
501: ENKLFVANVG DSRAILCRAG HPFALSKAHL ATCIDERNRV IGEGGRIEWL VDTWRVAPAG LQVTRSIGDD DLKPAVTAEP EISETILSAD DEFLVMASDG
601: LWDVMNDEEV IGIIRDTVKE PSMCSKRLAT EAAARGSGDN ITVIVVFLRP VSTAERIY

Arabidopsis Description

Protein kinase and PP2C-like domain-containing protein [Source:UniProtKB/Swiss-Prot;Acc:Q940A2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.