Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5D01G369200.1 | Wheat | cytosol | 96.05 | 95.8 |
TraesCS5B01G362300.1 | Wheat | cytosol | 95.79 | 95.29 |
HORVU5Hr1G088700.1 | Barley | cytosol | 91.84 | 88.13 |
Os09t0558000-01 | Rice | plasma membrane | 70.26 | 75.85 |
KXG36172 | Sorghum | cytosol | 69.47 | 72.73 |
Zm00001d021390_P001 | Maize | cytosol | 68.42 | 71.63 |
TraesCS7A01G504800.1 | Wheat | cytosol | 62.37 | 59.55 |
TraesCS6A01G147900.4 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 61.05 | 58.59 |
TraesCS4A01G120800.1 | Wheat | cytosol | 35.79 | 35.88 |
TraesCS7A01G532000.1 | Wheat | mitochondrion | 24.21 | 35.8 |
TraesCS2A01G354400.1 | Wheat | cytosol | 35.0 | 34.82 |
TraesCS6A01G037000.1 | Wheat | cytosol | 28.95 | 34.38 |
TraesCS6A01G363900.1 | Wheat | cytosol | 26.32 | 28.41 |
TraesCS7A01G371100.1 | Wheat | plastid | 26.84 | 28.33 |
TraesCS7A01G143200.2 | Wheat | cytosol | 26.05 | 28.05 |
TraesCS5A01G076600.1 | Wheat | cytosol | 27.89 | 27.6 |
TraesCS1A01G202300.1 | Wheat | plastid | 25.53 | 26.22 |
TraesCS1A01G077500.1 | Wheat | cytosol | 26.32 | 26.04 |
TraesCS5A01G181600.1 | Wheat | nucleus | 22.63 | 23.89 |
TraesCS3A01G200800.1 | Wheat | cytosol | 23.42 | 13.55 |
Protein Annotations
KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.9 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 |
GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 |
InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 |
PANTHER:PTHR13832 | PANTHER:PTHR13832:SF385 | SMART:SM00331 | SMART:SM00332 | SUPFAM:SSF81606 | EnsemblPlantsGene:TraesCS5A01G359900 |
EnsemblPlants:TraesCS5A01G359900.1 | TIGR:cd00143 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:561660944..561666221
Molecular Weight (calculated)
41085.2 Da
IEP (calculated)
4.870
GRAVY (calculated)
-0.524
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTYLSTPKT EKQTADGDGA RVRYGLASMQ GWRTTMEDAH TAVPQLDERT SFFAVFDGHG GKAVAKFCAK HLHMQFLRSA AYCSGDLASS ARKAFLRMDE
101: MMKGQRGWRE LAELGEKGPK FAGMLESIIW SPKGGDADKL GDGWHSEEGP HSDYSGPTCG STACVAIIRN DQLVVANAGD SRCVISRKGQ AHDLSRDHKP
201: ELQSEKERIE NAGGYIVAGR VNGSLNLTRA IGDMEMKENK LLPAEKQTVS AEPEVNTVTL SEDDEFIVLA CDGIWDCMSS QQVVDFVHEK LKTEDSLSAV
301: CEKLLDRCLA PESGGEGCDN MTMILVVLKK PTDPAATSSS EQSPVTPTKP SATSSSEQSA VTNEEMRPSE PDAPETPSSK
101: MMKGQRGWRE LAELGEKGPK FAGMLESIIW SPKGGDADKL GDGWHSEEGP HSDYSGPTCG STACVAIIRN DQLVVANAGD SRCVISRKGQ AHDLSRDHKP
201: ELQSEKERIE NAGGYIVAGR VNGSLNLTRA IGDMEMKENK LLPAEKQTVS AEPEVNTVTL SEDDEFIVLA CDGIWDCMSS QQVVDFVHEK LKTEDSLSAV
301: CEKLLDRCLA PESGGEGCDN MTMILVVLKK PTDPAATSSS EQSPVTPTKP SATSSSEQSA VTNEEMRPSE PDAPETPSSK
001: MGTYLSSPKT EKLSEDGEND KLRFGLSSMQ GWRATMEDAH AAILDLDDKT SFFGVYDGHG GKVVAKFCAK YLHQQVISNE AYKTGDVETS LRRAFFRMDD
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS
101: MMQGQRGWRE LAVLGDKMNK FSGMIEGFIW SPRSGDTNNQ PDSWPLEDGP HSDFTGPTSG CTACVALIKD KKLFVANAGD SRCVISRKSQ AYNLSKDHKP
201: DLEVEKERIL KAGGFIHAGR INGSLNLTRA IGDMEFKQNK FLPSEKQMVT ADPDINTIDL CDDDDFLVVA CDGIWDCMSS QELVDFIHEQ LKSETKLSTV
301: CEKVVDRCLA PDTATGEGCD NMTIILVQFK KPNPSETEPE DSKPEPSEDE PSSSS
Arabidopsis Description
PPC4-2Probable protein phosphatase 2C 21 [Source:UniProtKB/Swiss-Prot;Acc:O81716]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.