CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P21740_001	Banana	cytosol, endoplasmic reticulum, peroxisome	65.23	67.09
KRH48594	Soybean	cytosol, peroxisome, plastid	50.15	67.08
Solyc03g118890.2.1	Tomato	cytosol, nucleus, peroxisome	57.54	61.72
AT1G18030.1	Thale cress	cytosol, nucleus, peroxisome	65.23	60.4
VIT_17s0000g03100.t01	Wine grape	cytosol, peroxisome, plastid	70.15	60.32
CDY26191	Canola	cytosol	64.62	57.85
PGSC0003DMT400014727	Potato	peroxisome	58.46	56.21
Bra025933.1-P	Field mustard	cytosol	64.92	55.24
CDY19191	Canola	cytosol, nucleus, peroxisome	64.0	52.93
KRH62979	Soybean	cytosol	14.15	28.57
KRH15637	Soybean	cytosol	27.08	25.96
KRH52312	Soybean	cytosol	27.38	25.8
KRH61828	Soybean	cytosol	28.92	25.41
KRH52505	Soybean	cytosol	28.92	25.41
KRH05380	Soybean	golgi	27.08	24.72
KRH28935	Soybean	nucleus	28.31	24.6
KRH76528	Soybean	cytosol	28.31	24.6
KRH44580	Soybean	endoplasmic reticulum	27.38	24.18
KRH51582	Soybean	cytosol	28.31	23.9
KRH47317	Soybean	cytosol	26.46	23.37
KRH61652	Soybean	cytosol	13.54	22.8
KRH60899	Soybean	cytosol	23.08	22.73
KRH31749	Soybean	cytosol	27.38	22.47
KRH69165	Soybean	cytosol	27.38	22.47
KRH36917	Soybean	cytosol	27.38	21.98
KRH20243	Soybean	cytosol	25.85	21.93
KRH03568	Soybean	cytosol	25.85	21.93
KRH02420	Soybean	cytosol	25.23	21.58
KRH50630	Soybean	cytosol	25.23	21.24
KRH37886	Soybean	cytosol	24.0	20.47
KRH12874	Soybean	cytosol	23.69	20.32
KRH61653	Soybean	cytosol	8.31	19.85
KRH71677	Soybean	cytosol	21.54	10.62

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100815852	Gene3D:3.60.40.10	MapMan:35.1	EMBL:ACUP02005915
EnsemblPlantsGene:GLYMA_09G179200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	UniProt:I1L484
InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:KRH39122	ProteinID:KRH39122	ProteinID:KRH39122.1	PFAM:PF00481
InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF348
SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002338D2E	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:40391697..40396683

Molecular Weight (calculated)

35479.2 Da

IEP (calculated)

7.238

GRAVY (calculated)

-0.307

Length

325 amino acids

Sequence
(BLAST)

001: MSESTETQKR QAADSESKEN AVASKKPKVE SCGTGTDGNA VKKPSFLIEA DAAEDKGARH TMEDASVMLL DASLDYPGNL RCAHFAIYDG HGGRLAAEYA
101: QKHLHRNVLS AGLPRELFDA KEARRAILNG FLKTDESLLQ ESAEGGWQDG ATAVCVWVLG QRVVVANLGD AKAVLARSTD GSQNHPDGVQ TQLKAIVLTR
201: EHKPIFPLER ARIEKAGGFV CPDGRLLARL EISRAFGDRQ FKKVGVVATP DIYNFEVNNT EHFIILGCDG LWGVFGPSDA VDFVQKLLNE GLPVATVSRR
301: LVREAVRERR CKDNCSAIII VFKHN

Best Arabidopsis Sequence Match ( AT1G18030.1 )
(BLAST)

001: MLEKESDLTA MEKPNNKHAA DSFSSEDLVS PVKKAKKSEE VSGGGEAVAA VGNREAEEDK PSFVSEEKKE FLVEADVAED KGARHTMEDV WVVLPDASLD
101: FPGTLRCAHF AIYDGHGGRL AAEFAKKHLH LNVLSAGLPR ELLDVKVAKK AILEGFRKTD ELLLQKSVSG GWQDGATAVC VWILDQKVFV ANIGDAKAVL
201: ARSSTTNELG NHTEAGNPLK AIVLTREHKA IYPQERSRIQ KSGGVISSNG RLQGRLEVSR AFGDRHFKKF GVSATPDIHA FELTERENFM ILGCDGLWEV
301: FGPSDAVGFV QKLLKEGLHV STVSRRLVKE AVKERRCKDN CTAIVIVFKR V

Arabidopsis Description

Probable protein phosphatase 2C 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMT1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.