CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62979	Soybean	cytosol	40.26	96.27
KRH60899	Soybean	cytosol	78.44	91.52
VIT_18s0122g01010.t01	Wine grape	cytosol	74.29	74.29
Solyc04g082600.2.1	Tomato	cytosol	69.35	69.35
PGSC0003DMT400025874	Potato	cytosol	69.09	69.09
GSMUA_Achr11P...	Banana	plastid	64.42	66.67
GSMUA_Achr9P23890_001	Banana	plastid	64.42	66.13
GSMUA_Achr5P11730_001	Banana	cytosol, mitochondrion, nucleus	64.94	65.27
TraesCS1A01G202300.1	Wheat	plastid	61.82	64.32
GSMUA_Achr4P25900_001	Banana	cytosol	63.64	64.14
TraesCS1D01G205700.1	Wheat	plastid	61.56	64.05
TraesCS1B01G216500.1	Wheat	plastid	61.56	64.05
Zm00001d000391_P002	Maize	plastid	61.56	63.71
KXG39006	Sorghum	plastid	61.3	63.44
Zm00001d029772_P001	Maize	plastid	60.26	61.87
KRH28935	Soybean	nucleus	59.48	61.23
KRH76528	Soybean	cytosol	59.48	61.23
HORVU1Hr1G052160.1	Barley	plastid	61.82	59.65
GSMUA_AchrUn_...	Banana	cytosol	66.23	56.79
KRH61828	Soybean	cytosol	47.53	49.46
KRH52505	Soybean	cytosol	47.53	49.46
KRH31749	Soybean	cytosol	46.49	45.2
KRH12874	Soybean	cytosol	44.16	44.85
KRH69165	Soybean	cytosol	45.97	44.7
KRH20243	Soybean	cytosol	44.42	44.65
KRH37886	Soybean	cytosol	43.9	44.36
KRH02420	Soybean	cytosol	43.64	44.21
KRH03568	Soybean	cytosol	43.64	43.86
KRH50630	Soybean	cytosol	43.12	43.01
KRH36917	Soybean	cytosol	45.19	42.96
KRH39122	Soybean	cytosol	23.9	28.31
KRH52312	Soybean	cytosol	23.9	26.67
KRH44580	Soybean	endoplasmic reticulum	24.68	25.82
KRH47317	Soybean	cytosol	24.42	25.54
KRH15637	Soybean	cytosol	22.34	25.37
KRH05380	Soybean	golgi	22.34	24.16
KRH61652	Soybean	cytosol	11.69	23.32
KRH48594	Soybean	cytosol, peroxisome, plastid	14.03	22.22
KRH61653	Soybean	cytosol	7.79	22.06
KRH71677	Soybean	cytosol	27.53	16.09

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100778015	MapMan:15.5.38	MapMan:18.4.24.2.7	Gene3D:3.60.40.10
EMBL:ACUP02003381	EnsemblPlantsGene:GLYMA_06G016100	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	UniProt:I1K7B1	InterPro:IPR001932
InterPro:IPR036457	EnsemblPlants:KRH51582	ProteinID:KRH51582	ProteinID:KRH51582.1	PFAM:PF00481	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF528	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002339FE1	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:1202587..1205865

Molecular Weight (calculated)

41911.2 Da

IEP (calculated)

5.161

GRAVY (calculated)

-0.179

Length

385 amino acids

Sequence
(BLAST)

001: MHDLGATMPV GMDFPPPFTM LEDKDSAFVV DDQKSGDIKP MTKGKPPRHA SGLRHSVSTT RLLAVADLSL DVGVTGSKSS SEEKTEFLPI FRSGSCAERG
101: PKQYMEDEHI CIDNLIQHIG PASTIPLPGA FYGVFDGHGG TDAALFIRNN ILRFIVEDSH FPTCVGEAIT SAFLKADFAF ADSSSLDISS GTTALTALVF
201: GRTMIVANAG DCRAVLGRRG RAIEMSKDQK PDCISERLRI EKLGGVVYDG YLNGQLSVSR ALGDWHMKGS KGSACPLSAE PELQEINLTE DDEFLIMGCD
301: GLWDVMSNQC AVTMARKELM IHNDPQRCSR ELVREALKRN SCDNLTVIVI CFSPDPPPRI ETPPSRVRRS ISAEGLNLLK DVLDC

Best Arabidopsis Sequence Match ( AT2G33700.1 )
(BLAST)

001: MSMDFSPLLT VLEGDFNKDN TSSATEIDTL ENLDDTRQIS KGKPPRHLTS SATRLQLAAN ADVDVCNLVM KSLDDKSEFL PVYRSGSCAE QGAKQFMEDE
101: HICIDDLVNH LGAAIQCSSL GAFYGVFDGH GGTDAAHFVR KNILRFIVED SSFPLCVKKA IKSAFLKADY EFADDSSLDI SSGTTALTAF IFGRRLIIAN
201: AGDCRAVLGR RGRAIELSKD HKPNCTAEKV RIEKLGGVVY DGYLNGQLSV ARAIGDWHMK GPKGSACPLS PEPELQETDL SEDDEFLIMG CDGLWDVMSS
301: QCAVTIARKE LMIHNDPERC SRELVREALK RNTCDNLTVI VVCFSPDPPQ RIEIRMQSRV RRSISAEGLN LLKGVLDGYP

Arabidopsis Description

PP2C27Probable protein phosphatase 2C 27 [Source:UniProtKB/Swiss-Prot;Acc:P93006]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.