Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20937 | Canola | cytosol | 85.38 | 87.67 |
| CDX93640 | Canola | cytosol | 84.33 | 86.13 |
| Bra018701.1-P | Field mustard | cytosol | 84.33 | 86.13 |
| AT3G17250.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plastid | 68.15 | 61.85 |
| KRH02420 | Soybean | cytosol | 56.14 | 56.58 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.34 | 56.27 |
| KRH36917 | Soybean | cytosol | 59.27 | 56.05 |
| KRH50630 | Soybean | cytosol | 55.87 | 55.44 |
| VIT_05s0020g00390.t01 | Wine grape | plastid | 54.31 | 53.33 |
| Os01t0295700-01 | Rice | cytosol | 52.22 | 52.63 |
| TraesCS5D01G089900.1 | Wheat | cytosol | 51.96 | 52.09 |
| Os05t0134200-01 | Rice | cytosol | 52.74 | 51.93 |
| TraesCS5A01G076600.1 | Wheat | cytosol | 51.96 | 51.82 |
| GSMUA_Achr8P22250_001 | Banana | cytosol | 49.87 | 51.76 |
| TraesCS5B01G082500.1 | Wheat | cytosol | 51.7 | 51.7 |
| TraesCS1B01G095600.1 | Wheat | cytosol | 51.17 | 51.04 |
| TraesCS1D01G079600.1 | Wheat | cytosol | 50.65 | 50.79 |
| HORVU1Hr1G016640.2 | Barley | cytosol | 50.65 | 50.79 |
| AT3G62260.2 | Thale cress | cytosol | 50.91 | 50.78 |
| GSMUA_Achr10P... | Banana | cytosol | 53.0 | 50.75 |
| GSMUA_Achr3P08410_001 | Banana | cytosol | 54.05 | 50.74 |
| TraesCS1A01G077500.1 | Wheat | cytosol | 50.65 | 50.52 |
| HORVU5Hr1G020300.3 | Barley | plastid | 50.65 | 50.13 |
| Zm00001d008171_P001 | Maize | cytosol | 51.7 | 50.0 |
| EES17660 | Sorghum | cytosol, peroxisome, plastid | 51.96 | 49.63 |
| PGSC0003DMT400069839 | Potato | cytosol | 51.7 | 49.5 |
| EES02832 | Sorghum | cytosol | 51.17 | 48.88 |
| Solyc05g053290.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 52.22 | 48.66 |
| Zm00001d024732_P001 | Maize | cytosol | 50.13 | 47.41 |
| AT3G51470.1 | Thale cress | nucleus | 38.38 | 40.72 |
| AT2G33700.1 | Thale cress | cytosol | 40.21 | 40.53 |
| AT2G25620.2 | Thale cress | nucleus | 37.86 | 36.99 |
| AT2G25070.2 | Thale cress | nucleus | 26.37 | 28.45 |
| AT1G18030.1 | Thale cress | cytosol, nucleus, peroxisome | 24.02 | 26.21 |
| AT4G31860.1 | Thale cress | cytosol | 23.5 | 25.21 |
| AT2G40860.1 | Thale cress | plastid | 27.15 | 15.81 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:15.5.38 | Gene3D:3.60.40.10 | EntrezGene:841222 | ProteinID:AAF79528.1 |
| ProteinID:AAG51521.1 | ProteinID:AEE32241.1 | EMBL:AK176010 | EMBL:AK176676 | ArrayExpress:AT1G48040 | EnsemblPlantsGene:AT1G48040 |
| RefSeq:AT1G48040 | TAIR:AT1G48040 | RefSeq:AT1G48040-TAIR-G | EnsemblPlants:AT1G48040.1 | TAIR:AT1G48040.1 | EMBL:BT015400 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0043169 | GO:GO:0046872 | InterPro:IPR001932 | InterPro:IPR036457 | RefSeq:NP_175238.2 | PFAM:PF00481 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
| ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF165 | UniProt:Q9LNF4 | SMART:SM00331 |
| SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI00005DC1C9 | : | : | : |
Description
Probable protein phosphatase 2C 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNF4]
Coordinates
chr1:-:17719584..17721891
Molecular Weight (calculated)
42107.9 Da
IEP (calculated)
4.582
GRAVY (calculated)
-0.123
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MILSQTMVAE AEIRVLDVKC HISAPKDQKN FQIDEVRVSE SVRAEISGSA ETPRFGSGMS CVTTTIGESA SDFIPTIRSG SFADIRSRET MEDEHICIDD
101: LSAHLGSYNF SVPSAFYGVF DGHGGPEAAI FMKENLTRLF FQDAVFPEMP SIVDAFFLEE LENSHRKAFA LADLAMADET IVSGSCGTTA LTALIIGRHL
201: LVANAGDCRA VLCRRGVAVD MSFDHRSTYE PERRRIEDLG GYFEDGYLNG VLAVTRAIGD WELKNPFTDS SSPLISDPEI GQIILTEDDE FLILACDGIW
301: DVLSSQNAVS NVRQGLRRHG DPRQCAMELG KEAARLQSSD NMTVIVICFS SVPSSPKQPQ RRRLRFCVSD EARARLQAML AGE
101: LSAHLGSYNF SVPSAFYGVF DGHGGPEAAI FMKENLTRLF FQDAVFPEMP SIVDAFFLEE LENSHRKAFA LADLAMADET IVSGSCGTTA LTALIIGRHL
201: LVANAGDCRA VLCRRGVAVD MSFDHRSTYE PERRRIEDLG GYFEDGYLNG VLAVTRAIGD WELKNPFTDS SSPLISDPEI GQIILTEDDE FLILACDGIW
301: DVLSSQNAVS NVRQGLRRHG DPRQCAMELG KEAARLQSSD NMTVIVICFS SVPSSPKQPQ RRRLRFCVSD EARARLQAML AGE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.