Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036796.1-P | Field mustard | nucleus | 81.16 | 93.02 |
| CDX78007 | Canola | nucleus | 91.69 | 91.69 |
| CDX73719 | Canola | nucleus | 91.41 | 91.41 |
| CDY33277 | Canola | nucleus | 89.2 | 90.2 |
| CDY16304 | Canola | nucleus | 88.64 | 90.14 |
| Bra038901.1-P | Field mustard | nucleus | 88.92 | 89.92 |
| VIT_07s0031g02160.t01 | Wine grape | cytosol | 71.75 | 71.75 |
| KRH28935 | Soybean | nucleus | 70.08 | 67.65 |
| KRH76528 | Soybean | cytosol | 69.81 | 67.38 |
| PGSC0003DMT400059610 | Potato | cytosol | 68.42 | 66.58 |
| GSMUA_Achr11P... | Banana | plastid | 65.93 | 63.98 |
| PGSC0003DMT400003812 | Potato | cytosol, mitochondrion | 67.59 | 63.54 |
| Solyc02g082490.2.1 | Tomato | cytosol | 67.31 | 63.28 |
| AT2G33700.1 | Thale cress | cytosol | 64.27 | 61.05 |
| GSMUA_Achr4P25900_001 | Banana | cytosol | 64.54 | 60.99 |
| TraesCS1A01G202300.1 | Wheat | plastid | 61.5 | 60.0 |
| KXG39006 | Sorghum | plastid | 61.77 | 59.95 |
| TraesCS1B01G216500.1 | Wheat | plastid | 61.22 | 59.73 |
| Zm00001d000391_P002 | Maize | plastid | 61.5 | 59.68 |
| TraesCS1D01G205700.1 | Wheat | plastid | 60.94 | 59.46 |
| GSMUA_Achr5P11730_001 | Banana | cytosol, mitochondrion, nucleus | 62.88 | 59.27 |
| GSMUA_Achr9P23890_001 | Banana | plastid | 61.22 | 58.93 |
| Zm00001d029772_P001 | Maize | plastid | 60.66 | 58.4 |
| HORVU1Hr1G052160.1 | Barley | plastid | 60.94 | 55.14 |
| GSMUA_AchrUn_... | Banana | cytosol | 65.1 | 52.34 |
| AT2G25620.2 | Thale cress | nucleus | 46.54 | 42.86 |
| AT3G62260.2 | Thale cress | cytosol | 43.77 | 41.15 |
| AT1G48040.1 | Thale cress | cytosol | 40.72 | 38.38 |
| AT3G17250.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plastid | 39.89 | 34.12 |
| AT1G18030.1 | Thale cress | cytosol, nucleus, peroxisome | 28.25 | 29.06 |
| AT2G25070.2 | Thale cress | nucleus | 28.25 | 28.73 |
| AT4G31860.1 | Thale cress | cytosol | 25.21 | 25.49 |
| AT2G40860.1 | Thale cress | plastid | 27.98 | 15.35 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:15.5.38 | MapMan:18.4.24.2.7 | Gene3D:3.60.40.10 | EntrezGene:824310 |
| ProteinID:AEE78796.1 | ArrayExpress:AT3G51470 | EnsemblPlantsGene:AT3G51470 | RefSeq:AT3G51470 | TAIR:AT3G51470 | RefSeq:AT3G51470-TAIR-G |
| EnsemblPlants:AT3G51470.1 | TAIR:AT3G51470.1 | Unigene:At.50267 | EMBL:BT015377 | EMBL:BT015677 | ProteinID:CAB63011.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0043169 | GO:GO:0046872 | InterPro:IPR001932 | InterPro:IPR036457 | RefSeq:NP_190715.1 | PFAM:PF00481 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | InterPro:PP2C | InterPro:PP2C_BS |
| InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF304 |
| UniProt:Q9SD02 | SMART:SM00331 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI0000048831 | SEG:seg |
Description
Probable protein phosphatase 2C 47 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD02]
Coordinates
chr3:-:19097722..19099275
Molecular Weight (calculated)
39488.0 Da
IEP (calculated)
5.477
GRAVY (calculated)
-0.343
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVTEVSPM INTLEVADDK MTNLSSSGKP PRNISAMRHC NSTAWLTDYE GDERFGAKSP EGVNSTFQPV FRSGSWSDKG PKQSMEDEFI CVDDLTEYIG
101: SSTGAFYGVF DGHGGVDAAS FTKKNIMKLV MEDKHFPTST KKATRSAFVK TDHALADASS LDRSSGTTAL TALILDKTML IANAGDSRAV LGKRGRAIEL
201: SKDHKPNCTS ERLRIEKLGG VIYDGYLNGQ LSVARALGDW HIKGTKGSLC PLSCEPELEE IVLTEEDEYL IMGCDGLWDV MSSQCAVTMV RRELMQHNDP
301: ERCSQALVKE ALQRNSCDNL TVVVVCFSPE APPRIEIPKS HKRRSISAEG LDLLKGVLNE L
101: SSTGAFYGVF DGHGGVDAAS FTKKNIMKLV MEDKHFPTST KKATRSAFVK TDHALADASS LDRSSGTTAL TALILDKTML IANAGDSRAV LGKRGRAIEL
201: SKDHKPNCTS ERLRIEKLGG VIYDGYLNGQ LSVARALGDW HIKGTKGSLC PLSCEPELEE IVLTEEDEYL IMGCDGLWDV MSSQCAVTMV RRELMQHNDP
301: ERCSQALVKE ALQRNSCDNL TVVVVCFSPE APPRIEIPKS HKRRSISAEG LDLLKGVLNE L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.