Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G092160.4 | Barley | cytosol | 100.0 | 100.0 |
| TraesCS5A01G369900.1 | Wheat | cytosol | 89.12 | 93.57 |
| TraesCS5B01G372200.1 | Wheat | cytosol | 86.39 | 92.03 |
| TraesCS5D01G379300.1 | Wheat | cytosol | 81.63 | 90.23 |
| HORVU5Hr1G092100.1 | Barley | cytosol | 83.67 | 87.23 |
| HORVU5Hr1G092150.1 | Barley | cytosol | 83.67 | 87.23 |
| Os11t0453900-01 | Rice | nucleus | 55.1 | 53.64 |
| HORVU6Hr1G011050.1 | Barley | cytosol | 44.9 | 46.81 |
| HORVU6Hr1G084010.1 | Barley | cytosol | 53.74 | 41.36 |
| HORVU5Hr1G103460.2 | Barley | cytosol | 50.34 | 39.36 |
| HORVU6Hr1G084070.10 | Barley | cytosol | 51.7 | 37.07 |
| HORVU3Hr1G089300.1 | Barley | cytosol | 51.02 | 23.89 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G092120.1 | EnsemblPlantsGene:HORVU5Hr1G092120 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009415 | GO:GO:0009628 |
| InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 | PANTHER:PTHR33346:SF4 | PFAM:PF00257 | ScanProsite:PS00315 |
| ScanProsite:PS00823 | SEG:seg | UniParc:UPI000B47568C | UniProt:A0A287S8C5 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr5H:+:587612623..587613339
Molecular Weight (calculated)
15118.6 Da
IEP (calculated)
9.747
GRAVY (calculated)
-0.997
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: LLPLRSTTME YQGQHGHATD KVEEYGQPVA GHGGFTGGPT GTHGAAGVGG AQLQATRDGH KTDGVLRRSG SSSSSSSEDD GVGGRRKKGM KEKIKEKLPG
101: GAHKDAAGQQ QQTAMAGEYA GTHGTEATGE KKGVMDKIKE KLPGGQH
101: GAHKDAAGQQ QQTAMAGEYA GTHGTEATGE KKGVMDKIKE KLPGGQH
001: MASYQNRPGG QATDEYGNPI QQQYDEYGNP MGGGGYGTGG GGGATGGQGY GTGGQGYGSG GQGYGTGGQG YGTGTGTEGF GTGGGARHHG QEQLHKESGG
101: GLGGMLHRSG SGSSSSSEDD GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK LPGGGR
101: GLGGMLHRSG SGSSSSSEDD GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK LPGGGR
Arabidopsis Description
RAB18RAB18 [Source:UniProtKB/TrEMBL;Acc:A0A178UN24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.