Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G086200.1 | Wheat | nucleus | 85.82 | 80.13 |
| TraesCS6A01G059800.1 | Wheat | cytosol | 85.11 | 78.43 |
| TraesCSU01G122200.1 | Wheat | cytosol | 78.72 | 74.5 |
| EES18117 | Sorghum | cytosol | 58.16 | 53.95 |
| Zm00001d037894_P001 | Maize | cytosol | 60.99 | 51.19 |
| HORVU5Hr1G092100.1 | Barley | cytosol | 49.65 | 49.65 |
| HORVU5Hr1G092150.1 | Barley | cytosol | 49.65 | 49.65 |
| HORVU5Hr1G103460.2 | Barley | cytosol | 65.96 | 49.47 |
| HORVU5Hr1G092120.1 | Barley | cytosol | 46.81 | 44.9 |
| HORVU5Hr1G092160.4 | Barley | cytosol | 46.81 | 44.9 |
| HORVU6Hr1G084010.1 | Barley | cytosol | 56.03 | 41.36 |
| HORVU6Hr1G084070.10 | Barley | cytosol | 59.57 | 40.98 |
| HORVU3Hr1G089300.1 | Barley | cytosol | 54.61 | 24.52 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G011050.1 | EnsemblPlantsGene:HORVU6Hr1G011050 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009415 | GO:GO:0009628 |
| InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 | PANTHER:PTHR33346:SF3 | PFAM:PF00257 | ScanProsite:PS00823 |
| SEG:seg | UniParc:UPI000B46C3A9 | UniProt:A0A287TAN0 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr6H:+:19541242..19542101
Molecular Weight (calculated)
14224.4 Da
IEP (calculated)
7.183
GRAVY (calculated)
-0.887
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYRGQQDHA VDEYGDPVAV HGSMGARSAA GAFTGAGGQL QHGTEERKTG GILRRSGSSS SSAEDDGMGG RREKGVKEKV KEKLPGGQHM AAGTGAGGAY
101: GQHTAAGTGA GGDYGQQGNA GMAGEEKGVV DKIKEKLPGQ H
101: GQHTAAGTGA GGDYGQQGNA GMAGEEKGVV DKIKEKLPGQ H
001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
Arabidopsis Description
XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.