Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G059800.1 | Wheat | cytosol | 96.03 | 94.77 |
| TraesCSU01G122200.1 | Wheat | cytosol | 88.74 | 89.93 |
| HORVU6Hr1G011050.1 | Barley | cytosol | 80.13 | 85.82 |
| EES18117 | Sorghum | cytosol | 63.58 | 63.16 |
| Zm00001d037894_P001 | Maize | cytosol | 66.23 | 59.52 |
Protein Annotations
| EnsemblPlants:TraesCSU01G086200.1 | EnsemblPlantsGene:TraesCSU01G086200 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009415 | GO:GO:0009628 |
| InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 | PANTHER:PTHR33346:SF3 | PFAM:PF00257 | ScanProsite:PS00315 |
| ScanProsite:PS00823 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrUn:+:76960885..76961460
Molecular Weight (calculated)
15289.6 Da
IEP (calculated)
9.677
GRAVY (calculated)
-1.011
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEYQGQHGH AVDEYGDPVA GHGNPVARSA AGAFTGAGGQ LQHGREEHKT GGILHRSGSS SSSSSSEDDG MGGRRKKGVK KKIKEKLPGG HKDNQQHIAA
101: GTGAGGAYGQ HTAAGTGAGG DYGQQGHAGM AGAGEKKGLM DKIKEKLPGQ H
101: GTGAGGAYGQ HTAAGTGAGG DYGQQGHAGM AGAGEKKGLM DKIKEKLPGQ H
001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
Arabidopsis Description
XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.