Factsheet for Zm00001d037894_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18117	Sorghum	cytosol	72.62	80.26
TraesCS6D01G333200.1	Wheat	cytosol	65.48	70.97
TraesCS5B01G426800.1	Wheat	cytosol	62.5	70.0
TraesCS5A01G424800.1	Wheat	cytosol	61.9	69.8
TraesCS5D01G433200.1	Wheat	cytosol	61.9	68.42
TraesCS6A01G350700.1	Wheat	cytosol	61.9	68.42
TraesCS5B01G426700.1	Wheat	cytosol	60.71	68.0
TraesCS6B01G383600.1	Wheat	cytosol	63.1	67.09
TraesCS5D01G433300.1	Wheat	cytosol	61.31	66.88
TraesCSU01G086200.1	Wheat	nucleus	59.52	66.23
TraesCS6A01G059800.1	Wheat	cytosol	60.12	66.01
TraesCS5A01G424700.1	Wheat	cytosol	43.45	65.77
TraesCS6B01G383800.1	Wheat	cytosol	64.29	65.06
TraesCSU01G122200.1	Wheat	cytosol	57.14	64.43
TraesCS6D01G333000.1	Wheat	cytosol	60.71	62.96
TraesCS6D01G333600.1	Wheat	cytosol	61.9	62.28
TraesCS6D01G333100.1	Wheat	cytosol	52.98	61.81
TraesCS6A01G350600.1	Wheat	cytosol	59.52	61.73
HORVU6Hr1G011050.1	Barley	cytosol	51.19	60.99
TraesCS6D01G333300.1	Wheat	cytosol	55.95	58.75
HORVU6Hr1G084010.1	Barley	cytosol	66.67	58.64
TraesCS6A01G350800.1	Wheat	plastid	47.02	55.24
HORVU5Hr1G103460.2	Barley	cytosol	61.31	54.79
HORVU6Hr1G084070.10	Barley	cytosol	64.29	52.68
TraesCS6D01G332900.2	Wheat	cytosol	64.88	47.19
TraesCS6A01G350500.1	Wheat	cytosol	61.9	47.06
TraesCS6B01G383500.2	Wheat	cytosol	64.29	46.75
TraesCS6A01G350900.1	Wheat	nucleus	49.4	43.68
Zm00001d045321_P001	Maize	cytosol	55.95	28.83
Zm00001d010102_P001	Maize	cytosol	55.36	28.79
Zm00001d010119_P001	Maize	extracellular	55.36	28.62
Zm00001d010105_P001	Maize	cytosol	54.76	28.48
Zm00001d010094_P001	Maize	cytosol	50.6	25.0

Protein Annotations

MapMan:35.1	UniProt:A3KLI1	ProteinID:AQK85134.1	EMBL:BT043257	EMBL:BT064444	ProteinID:CAM56275.1
ProteinID:CAM56276.1	ProteinID:CAM56277.1	ProteinID:CAM56278.1	InterPro:Dehydrin	InterPro:Dehydrin_CS	GO:GO:0001786
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0006950	GO:GO:0008150
GO:GO:0008289	GO:GO:0009415	GO:GO:0009628	GO:GO:0012506	GO:GO:0016020	GO:GO:0035091
GO:GO:0070300	GO:GO:1901611	PFAM:PF00257	ScanProsite:PS00315	ScanProsite:PS00823	PANTHER:PTHR33346
PANTHER:PTHR33346:SF3	UniParc:UPI0000F3561A	EnsemblPlantsGene:Zm00001d037894	EnsemblPlants:Zm00001d037894_P001	EnsemblPlants:Zm00001d037894_T001	SEG:seg

Description

dehydrin1Dehydrin DHN1

Coordinates

chr6:-:141324495..141325549

Molecular Weight (calculated)

17076.7 Da

IEP (calculated)

9.337

GRAVY (calculated)

-1.144

Length

168 amino acids

Sequence
(BLAST)

001: MEYGQQGQRG HGATGHVDQY GNPVGGVEHG TGGMRHGTGT TGGMGQLGEH GGAGMGGGQF QPAREEHKTG GILHRSGSSS SSSSEDDGMG GRRKKGIKEK
101: IKEKLPGGHK DDQHATATTG GAYGQQGHTG SAYGQQGHTG GAYATGTEGT GEKKGIMDKI KEKLPGQH

Best Arabidopsis Sequence Match ( AT3G50980.1 )
(BLAST)

001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH

Arabidopsis Description

XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.