Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G332900.2 | Wheat | cytosol | 94.15 | 83.55 |
| TraesCS6A01G350500.1 | Wheat | cytosol | 83.9 | 77.83 |
| TraesCS6B01G383500.2 | Wheat | cytosol | 86.34 | 76.62 |
| HORVU6Hr1G084010.1 | Barley | cytosol | 68.78 | 73.82 |
| EES18117 | Sorghum | cytosol | 50.24 | 67.76 |
| Zm00001d037894_P001 | Maize | cytosol | 52.68 | 64.29 |
| HORVU6Hr1G011050.1 | Barley | cytosol | 40.98 | 59.57 |
| HORVU5Hr1G103460.2 | Barley | cytosol | 49.76 | 54.26 |
| HORVU5Hr1G092100.1 | Barley | cytosol | 36.59 | 53.19 |
| HORVU5Hr1G092150.1 | Barley | cytosol | 36.59 | 53.19 |
| HORVU5Hr1G092120.1 | Barley | cytosol | 37.07 | 51.7 |
| HORVU5Hr1G092160.4 | Barley | cytosol | 37.07 | 51.7 |
| HORVU3Hr1G089300.1 | Barley | cytosol | 47.8 | 31.21 |
Protein Annotations
| MapMan:35.2 | UniProt:A3RHE3 | ProteinID:ABO14375.1 | ProteinID:ABO14378.1 | ProteinID:ABO14379.1 | ProteinID:ABO14387.1 |
| ProteinID:ABO14388.1 | ProteinID:ABO14395.1 | ProteinID:ABO14398.1 | ProteinID:ABO14402.1 | ProteinID:ABO14404.1 | ProteinID:ABO14405.1 |
| ProteinID:ABO14406.1 | ProteinID:AGT62705.1 | InterPro:Dehydrin | InterPro:Dehydrin_CS | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009415 | GO:GO:0009628 | EnsemblPlantsGene:HORVU6Hr1G084070 | EnsemblPlants:HORVU6Hr1G084070.10 | PFAM:PF00257 | ScanProsite:PS00315 |
| ScanProsite:PS00823 | PANTHER:PTHR33346 | PANTHER:PTHR33346:SF3 | UniParc:UPI00000A9D6C | SEG:seg | : |
Description
Deyhydrin 4 [Source:UniProtKB/TrEMBL;Acc:A3RHE3]
Coordinates
chrchr6H:-:553228771..553229881
Molecular Weight (calculated)
20656.8 Da
IEP (calculated)
8.759
GRAVY (calculated)
-1.043
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYQGQQHGR VDEYGNPVAG HGVGTGMGTH GGVGTGAAAG GHYQPMRDEH QTGRGILHRS GSSSSSSSED DGMGGRRKKG IKEKIKEKLP GGHGDQQHNA
101: GTYGYGQQGT GMAGTGGTYG QQGHTGMTGM GATDGTYGQQ GHTGMAGTGA HGTAATGGTY GQQGHTGMTG TGMHGTGGTY GQHGTDTGEK KGIMDKIKEK
201: LPGQH
101: GTYGYGQQGT GMAGTGGTYG QQGHTGMTGM GATDGTYGQQ GHTGMAGTGA HGTAATGGTY GQQGHTGMTG TGMHGTGGTY GQHGTDTGEK KGIMDKIKEK
201: LPGQH
001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
Arabidopsis Description
XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.