Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G350500.1 | Wheat | cytosol | 88.31 | 92.31 |
| TraesCS6D01G332900.2 | Wheat | cytosol | 90.04 | 90.04 |
| HORVU6Hr1G084070.10 | Barley | cytosol | 76.62 | 86.34 |
| TraesCS6B01G383800.1 | Wheat | cytosol | 55.84 | 77.71 |
| TraesCS6B01G383600.1 | Wheat | cytosol | 51.95 | 75.95 |
| TraesCS5B01G426800.1 | Wheat | cytosol | 45.45 | 70.0 |
| TraesCS5B01G426700.1 | Wheat | cytosol | 43.72 | 67.33 |
| EES18117 | Sorghum | cytosol | 44.16 | 67.11 |
| Zm00001d037894_P001 | Maize | cytosol | 46.75 | 64.29 |
| TraesCS5B01G372200.1 | Wheat | cytosol | 34.63 | 57.97 |
| TraesCS5B01G372100.1 | Wheat | cytosol | 34.63 | 55.94 |
| TraesCS3B01G428200.1 | Wheat | cytosol | 45.02 | 37.96 |
| TraesCS4B01G064200.1 | Wheat | cytosol | 41.13 | 20.79 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G383500.2 | EnsemblPlantsGene:TraesCS6B01G383500 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009415 | GO:GO:0009628 |
| InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 | PANTHER:PTHR33346:SF3 | PFAM:PF00257 | ScanProsite:PS00315 |
| ScanProsite:PS00823 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr6B:+:658403069..658403852
Molecular Weight (calculated)
23230.7 Da
IEP (calculated)
9.638
GRAVY (calculated)
-1.074
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYQGQQQRG RVDEYGNPVA GHGVGTGMET HGGVGTGAAA GGHFQPMRDE HQTGRGILHR SGSSSSSSSE DDGMGGRRKK GIKEKIKEKL PGGHGDQQHT
101: GGTYRQQGTG MVGTGGTYGQ KGHTGMTGTG GTYGQQGHTG MTGTGGTYGQ QGHTGMTGTG GTYGQQGHTG MAGTGAHGTT ATGGTYGQPG HTGMTGTGAH
201: GTGGTYGQHG TDTGEKKGIM DKIKEKLPGQ H
101: GGTYRQQGTG MVGTGGTYGQ KGHTGMTGTG GTYGQQGHTG MTGTGGTYGQ QGHTGMTGTG GTYGQQGHTG MAGTGAHGTT ATGGTYGQPG HTGMTGTGAH
201: GTGGTYGQHG TDTGEKKGIM DKIKEKLPGQ H
001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
Arabidopsis Description
XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.