Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G383500.2 | Wheat | cytosol | 92.31 | 88.31 |
| TraesCS6D01G332900.2 | Wheat | cytosol | 91.4 | 87.45 |
| HORVU6Hr1G084070.10 | Barley | cytosol | 77.83 | 83.9 |
| TraesCS6A01G350700.1 | Wheat | cytosol | 52.04 | 75.66 |
| TraesCS6A01G350600.1 | Wheat | cytosol | 52.94 | 72.22 |
| TraesCS5A01G424800.1 | Wheat | cytosol | 46.15 | 68.46 |
| TraesCS6A01G059800.1 | Wheat | cytosol | 46.15 | 66.67 |
| EES18117 | Sorghum | cytosol | 45.25 | 65.79 |
| TraesCS5A01G424700.1 | Wheat | cytosol | 32.58 | 64.86 |
| Zm00001d037894_P001 | Maize | cytosol | 47.06 | 61.9 |
| TraesCS6A01G350800.1 | Wheat | plastid | 39.82 | 61.54 |
| TraesCS5A01G369900.1 | Wheat | cytosol | 35.29 | 55.71 |
| TraesCS5A01G369800.1 | Wheat | cytosol | 34.39 | 53.15 |
| TraesCS6A01G350900.1 | Wheat | nucleus | 42.53 | 49.47 |
| TraesCS3A01G396200.1 | Wheat | cytosol | 46.15 | 37.09 |
| TraesCS4A01G250900.1 | Wheat | cytosol | 41.18 | 20.0 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G350500.1 | EnsemblPlantsGene:TraesCS6A01G350500 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009415 | GO:GO:0009628 |
| InterPro:Dehydrin | InterPro:Dehydrin_CS | PANTHER:PTHR33346 | PANTHER:PTHR33346:SF3 | PFAM:PF00257 | ScanProsite:PS00315 |
| ScanProsite:PS00823 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr6A:+:582264814..582265572
Molecular Weight (calculated)
22050.2 Da
IEP (calculated)
9.454
GRAVY (calculated)
-1.071
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYQGQQQRG RVDEYGNPVA GHGVGTGAAA GGHFQPMRDE HQTGRGILHR SGSSSSSSSE DDGMGGRRKK GIKEKIKEKL PGGHGDQQNT GGTYGQQGTG
101: MAGTGGTYGQ QGHTGMTGTG GTYGQQGHTG MAGTGGAYGQ QGHTGMTGTG GTYGQQGHTG MAGTGAHGTT ATGGTYGQQG HAGMTGTGAH GTGGGYGQHG
201: TDTGEKKGIM DKIKEKLPGQ H
101: MAGTGGTYGQ QGHTGMTGTG GTYGQQGHTG MAGTGGAYGQ QGHTGMTGTG GTYGQQGHTG MAGTGAHGTT ATGGTYGQQG HAGMTGTGAH GTGGGYGQHG
201: TDTGEKKGIM DKIKEKLPGQ H
001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
Arabidopsis Description
XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.