Factsheet for TraesCS4A01G250900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G064200.1	Wheat	cytosol	68.57	68.27
TraesCS5A01G369900.1	Wheat	cytosol	18.24	59.29
TraesCS4D01G063100.1	Wheat	cytosol	55.38	58.6
TraesCS5A01G369800.1	Wheat	cytosol	17.8	56.64
TraesCS6A01G350700.1	Wheat	cytosol	18.24	54.61
TraesCS5A01G424800.1	Wheat	cytosol	17.58	53.69
TraesCS5A01G424700.1	Wheat	cytosol	12.97	53.15
TraesCS6A01G350600.1	Wheat	cytosol	17.8	50.0
TraesCS6A01G059800.1	Wheat	cytosol	16.7	49.67
Os11t0451700-00	Rice	plastid	32.31	45.09
TraesCS6A01G350800.1	Wheat	plastid	13.63	43.36
TraesCS6A01G350500.1	Wheat	cytosol	20.0	41.18
Zm00001d010102_P001	Maize	cytosol	27.91	39.32
Zm00001d010105_P001	Maize	cytosol	27.69	39.01
Zm00001d045321_P001	Maize	cytosol	27.91	38.96
Zm00001d010119_P001	Maize	extracellular	27.25	38.15
EER87862	Sorghum	cytosol	31.21	36.6
TraesCS6A01G350900.1	Wheat	nucleus	14.95	35.79
TraesCS3A01G396200.1	Wheat	cytosol	18.24	30.18
Zm00001d010094_P001	Maize	cytosol	17.36	23.24

Protein Annotations

EnsemblPlants:TraesCS4A01G250900.1	EnsemblPlantsGene:TraesCS4A01G250900	GO:GO:0006950	GO:GO:0008150	GO:GO:0009415	GO:GO:0009628
InterPro:Dehydrin	InterPro:Dehydrin_CS	PANTHER:PTHR33346	PANTHER:PTHR33346:SF9	PFAM:PF00257	ScanProsite:PS00315
ScanProsite:PS00823	SEG:seg	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr4A:-:562290028..562291481

Molecular Weight (calculated)

43743.8 Da

IEP (calculated)

9.275

GRAVY (calculated)

-0.779

Length

455 amino acids

Sequence
(BLAST)

001: MAHFQGQQHG HPATRVDEYG NPVTAGHGVT GTEGLGHFQG HGQQHGHPTT RLDEYGNPVT AGHGVGLGST GTGVHGAGHG GYGSTGTGAQ VGYGATGTGT
101: HDAGGYRGSG IAPRHGATDA GFHDAGGLDT RHAATGTHGT GHTAGLGGTG TGMTGTHGTG HTAGLGGTGT GVTGTHGTGH TGTGMTGTHG TGHTAGLGGT
201: GTGITGTHGA GHTGIGMTGT HGTGHTAGLG GTGTGITGTH GTGHTAGYDA TGTGITGTHG TGHTPGYGPT GTGITGTHGA AGTHPHGGLP EHKTRGILHR
301: SGSSSSSSSS SEDDGMGGRR KKGMKQKIKE KLPGGNKEQT TATGGYGPGY TGTTGTGGPG YTGTTGTGGT YGTTEGTHEK KGVMEKIKEK LPGGHKDTQP
401: HTTATGGYGH GTTGTGGGYG TGTTGTAGTH GATEGTHEKK GMMEKIKEKL PGGHH

Best Arabidopsis Sequence Match ( AT5G66400.1 )
(BLAST)

001: MASYQNRPGG QATDEYGNPI QQQYDEYGNP MGGGGYGTGG GGGATGGQGY GTGGQGYGSG GQGYGTGGQG YGTGTGTEGF GTGGGARHHG QEQLHKESGG
101: GLGGMLHRSG SGSSSSSEDD GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK LPGGGR

Arabidopsis Description

RAB18RAB18 [Source:UniProtKB/TrEMBL;Acc:A0A178UN24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.