Factsheet for TraesCS3A01G396200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G428200.1	Wheat	cytosol	92.73	93.07
TraesCS3D01G390200.1	Wheat	cytosol	88.73	88.73
HORVU3Hr1G089300.1	Barley	cytosol	83.27	72.93
TraesCS5A01G424700.1	Wheat	cytosol	24.73	61.26
TraesCS6A01G350700.1	Wheat	cytosol	33.45	60.53
TraesCS5A01G424800.1	Wheat	cytosol	32.73	60.4
Os11t0454000-01	Rice	cytosol	35.64	59.76
Os11t0454200-01	Rice	plastid	35.27	59.15
TraesCS6A01G059800.1	Wheat	cytosol	32.73	58.82
TraesCS6A01G350600.1	Wheat	cytosol	33.09	56.17
TraesCS5A01G369900.1	Wheat	cytosol	26.55	52.14
TraesCS5A01G369800.1	Wheat	cytosol	26.91	51.75
TraesCS6A01G350800.1	Wheat	plastid	25.82	49.65
TraesCS6A01G350500.1	Wheat	cytosol	37.09	46.15
TraesCS6A01G350900.1	Wheat	nucleus	27.27	39.47
TraesCS4A01G250900.1	Wheat	cytosol	30.18	18.24

Protein Annotations

EnsemblPlants:TraesCS3A01G396200.1	EnsemblPlantsGene:TraesCS3A01G396200	GO:GO:0006950	GO:GO:0008150	GO:GO:0009415	GO:GO:0009628
InterPro:Dehydrin	InterPro:Dehydrin_CS	PANTHER:PTHR33346	PANTHER:PTHR33346:SF4	PFAM:PF00257	ScanProsite:PS00315
ScanProsite:PS00823	SEG:seg	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3A:-:643460238..643461214

Molecular Weight (calculated)

27018.5 Da

IEP (calculated)

10.130

GRAVY (calculated)

-0.775

Length

275 amino acids

Sequence
(BLAST)

001: MEYQGQQGNL VDQHGNPVAA PGGATAVTGA PAGGQLQPAR EEHKTRGILH RSSSSSSSSS EDDGMGGRRK KGIKEKIKEK LPGARKQTYG QPAAPAGMTG
101: TGAAGGPYYV QPAPAGTAAH GTTATAGTYG QPAPTGMTGT GAHGTMAAGE KKGMKDKIME KLPGGHKNEQ HAMPTAGAYG QPGMTGTGVH GNTAPGGGYG
201: GQPGHAGMTG AGTHGSATTG GAYGHQGHPG VTGTGAHGTT ATGGAYSQQG HAGVTGTGEK KGIMDKIKEK LPGQH

Best Arabidopsis Sequence Match ( AT3G50980.1 )
(BLAST)

001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH

Arabidopsis Description

XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.