Factsheet for Os11t0454200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0454000-01	Rice	cytosol	90.85	90.85
Os11t0454300-01	Rice	plastid	67.07	63.95
Os11t0453900-01	Rice	nucleus	51.83	56.29
TraesCS3B01G428200.1	Wheat	cytosol	59.15	35.4
TraesCS3A01G396200.1	Wheat	cytosol	59.15	35.27
TraesCS3D01G390200.1	Wheat	cytosol	56.1	33.45
HORVU3Hr1G089300.1	Barley	cytosol	59.15	30.89
Os11t0451700-00	Rice	plastid	57.93	29.14

Protein Annotations

MapMan:35.1	EntrezGene:4350453	ProteinID:AAX96129.1	ProteinID:ABA93493.1	EMBL:AK063517	ProteinID:BAF28206.1
ProteinID:BAT13915.1	InterPro:Dehydrin	InterPro:Dehydrin_CS	ProteinID:EAZ18262.1	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006950	GO:GO:0008150	GO:GO:0009414
GO:GO:0009415	GO:GO:0009628	GO:GO:0009631	GO:GO:0009719	GO:GO:0009737	EnsemblPlantsGene:Os11g0454200
EnsemblPlants:Os11t0454200-01	PFAM:PF00257	ScanProsite:PS00315	ScanProsite:PS00823	PANTHER:PTHR33346	PANTHER:PTHR33346:SF3
UniProt:Q2R4Z5	UniParc:UPI0000509586	RefSeq:XP_015617609.1	SEG:seg	:	:

Description

RESPONSIVE TO ABA GENE 16BDehydrin RAB 16B. (Os11t0454200-01)

Coordinates

chr11:-:15336192..15337158

Molecular Weight (calculated)

16538.1 Da

IEP (calculated)

9.777

GRAVY (calculated)

-1.033

Length

164 amino acids

Sequence
(BLAST)

001: MDNYQGQHGY GADRVDVYGN PVGAGQYGGG ATAPGGGHGA MGMGGHAGAG AGGQFQPARE DHKTGGILHR SGSSSSSSSS EDDGMGGRRK KGIKEKIKEK
101: LPGGNKGNNH QQQQMMGNTG GAYGQQGHAG MTGAGTGVHG AEYGNAGEKK GFMDKIKEKL PGQH

Best Arabidopsis Sequence Match ( AT3G50980.1 )
(BLAST)

001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH

Arabidopsis Description

XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.