Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G379300.1 | Wheat | cytosol | 52.98 | 60.15 |
| TraesCS5B01G372200.1 | Wheat | cytosol | 54.3 | 59.42 |
| TraesCS5A01G369900.1 | Wheat | cytosol | 54.3 | 58.57 |
| TraesCS5D01G379200.1 | Wheat | cytosol | 54.97 | 58.04 |
| HORVU5Hr1G092100.1 | Barley | cytosol | 53.64 | 57.45 |
| HORVU5Hr1G092150.1 | Barley | cytosol | 53.64 | 57.45 |
| TraesCS5B01G372100.1 | Wheat | cytosol | 54.3 | 57.34 |
| TraesCS5A01G369800.1 | Wheat | cytosol | 52.98 | 55.94 |
| HORVU5Hr1G092120.1 | Barley | cytosol | 53.64 | 55.1 |
| HORVU5Hr1G092160.4 | Barley | cytosol | 53.64 | 55.1 |
| Os11t0454300-01 | Rice | plastid | 60.26 | 52.91 |
| Os11t0454200-01 | Rice | plastid | 56.29 | 51.83 |
| Os11t0454000-01 | Rice | cytosol | 53.64 | 49.39 |
| Os11t0451700-00 | Rice | plastid | 56.29 | 26.07 |
Protein Annotations
| MapMan:35.1 | EntrezGene:4350451 | ProteinID:AAX96132.1 | ProteinID:ABA93490.1 | EMBL:AK109096 | ProteinID:BAF28204.1 |
| ProteinID:BAT13913.1 | InterPro:Dehydrin | InterPro:Dehydrin_CS | ProteinID:EAZ18259.1 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009414 |
| GO:GO:0009415 | GO:GO:0009628 | GO:GO:0009631 | GO:GO:0009719 | GO:GO:0009737 | EnsemblPlantsGene:Os11g0453900 |
| EnsemblPlants:Os11t0453900-01 | PFAM:PF00257 | ScanProsite:PS00315 | ScanProsite:PS00823 | PANTHER:PTHR33346 | PANTHER:PTHR33346:SF4 |
| UniProt:Q2R4Z8 | UniParc:UPI0000509589 | RefSeq:XP_015617611.1 | SEG:seg | : | : |
Description
RESPONSIVE TO ABA GENE 16DDehydrin RAB 16D. (Os11t0453900-01)
Coordinates
chr11:-:15320288..15321526
Molecular Weight (calculated)
15552.8 Da
IEP (calculated)
9.805
GRAVY (calculated)
-1.248
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYQGQHGGH ASSRADEHGN PAVTTGNAPT GMGAGHIQEP AREDKKTDGV LRRSGSSSSS SSSEDDGMGG RRKKGIKEKI KEKLPGGNKG NNQQQQQEHT
101: TTTTGGAYGP QGHDTKIATG AHGGTAATTA DAGGEKKGIV DKIKEKLPGQ H
101: TTTTGGAYGP QGHDTKIATG AHGGTAATTA DAGGEKKGIV DKIKEKLPGQ H
001: MESYQNQSGA QQTHQQLDQF GNPFPATTGA YGTAGGAPAV AEGGGLSGML HRSGSSSSSS SEDDGLGGRR RKKKGITEKI KEKLPGHHDS NKTSSLGSTT
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
101: TAYDTGTVHH EKKGMMEKIK EKLPGGHH
Arabidopsis Description
XERO1Dehydrin Xero 1 [Source:UniProtKB/Swiss-Prot;Acc:P25863]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.